Protein Alignment Gld2 and usip-1

DIOPT Version :10

• Sequence 1: NP_651012.2
• Gene: Gld2 / 42602
• FlyBaseID: FBgn0038934
• Length: 1364
• Species: Drosophila melanogaster
• Sequence 2: NP_506056.1
• Gene: usip-1 / 179670
• WormBaseID: WBGene00014124
• Length: 662
• Species: Caenorhabditis elegans
• Alignment Length: 390
• Identity: 73/390 - (18%)
• Similarity: 138/390 - (35%)
• Gaps: 130/390 - (33%)

  Fly   982 SSISYFGSKC--------SDMDI---------------------------CMLACTNPNIDSRME 1011
            |:...|||..        ||:||                           |::  |:|...|.:|
 Worm   164 SACEMFGSFASPVRRNGYSDIDINVESVSAPGQRVSTNVRPLNEVVANPKCLI--THPLTKSELE 226

  Fly  1012 AVYHLHVMKEL---LGRTNMFQ---DFNLIEARVPILRFTDRCHKVEV-------DINFNNSVGI 1063
            ......::|.|   ....:.|:   :...:.||.||:.|.:    :||       |::.:|.:.:
 Worm   227 TYPQEEIIKILYRCFNENSAFKTKFEMRFLPARTPIIVFKN----IEVEGMNVSYDLSVHNQISV 287

  Fly  1064 RNTHLLYCYSQLD----WRVRPMALTVKQWAQYHNINNAK--------NMTISSYSLMLMVIHFL 1116
            ....||:.:...|    .|::...:.:..||:.:.:.:..        ...::||.:..:||||:
 Worm   288 EKASLLHEFIVKDKSKGSRMKNAMMFIVHWAKSNKLLSGDYPEEKLEVKTKLNSYIINQLVIHFV 352

  Fly  1117 QVGASPPVLPCLHNLYPEKFGLLQPNDFGYVDMNEVMAPYQSDNSQTL-GDLLLSF---LHYYSV 1177
            |...:.     :| :.|:.....:.|::               |..|| ||....|   ..||:.
 Worm   353 QAATNK-----VH-VNPQAKRDSRVNEY---------------NFDTLFGDYCKFFRELFKYYAN 396

  Fly  1178 FD------YGKYA-----ISIRVGGVLPIEVCRAATAPKNDIHQWNELCIEEPFDQTNTARSVYD 1231
            ||      |||.|     :|...|||                 :.:.|.:.:|.|.|:...:...
 Worm   397 FDFTNKAIYGKKAMQKKTLSSAHGGV-----------------EESPLMLMDPMDITHNISAKVT 444

  Fly  1232 TDTFERI-----KTIFVASYRRLDSTRNLSAIFEDYDGPTILM--QQPSVDSEIELYEGQHHRLL 1289
            .|..:.:     ..:|:......    :::.:.|.....|:||  ::|.:.....:.:|..|:.|
 Worm   445 EDAVKLLNGLIRNALFILKQNHF----HINYLLETNTMATMLMKSREPKISISTRVTDGAEHQYL 505

  Fly  1290  1289
             Worm   506  505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gld2	NP_651012.2	TRF4	<977..>1277	CDD:227585	70/376 (19%)
usip-1	NP_506056.1	NT_Pol-beta-like	142..297	CDD:472251	27/138 (20%)
		PAP_assoc	382..437	CDD:427532	17/71 (24%)