DRSC/TRiP Functional Genomics Resources

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Protein Alignment SKIP and Sash3

DIOPT Version :10

Sequence 1:NP_001262827.1 Gene:SKIP / 42601 FlyBaseID:FBgn0051163 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_001300678.1 Gene:Sash3 / 74131 MGIID:1921381 Length:381 Species:Mus musculus


Alignment Length:372 Identity:115/372 - (30%)
Similarity:163/372 - (43%) Gaps:61/372 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 ESPSLSPSPSSDYEDIGVTR--------------------GHGCLPPSLLAAKAKKNGLPHGKAN 553
            :...||...||.::|...::                    ..|.|.|.......||.|   .|..
Mouse    16 QKKKLSLQRSSSFKDFAKSKPSSPVVSEKEFNLDDNIPEDDSGVLTPEDSGKSGKKLG---KKWR 77

  Fly   554 TICQKATVHHSGEM--RSSAKEIGAFNENGRNFVATKDTSRDFSNSQDNTDRGSMSDQAFACSAS 616
            .:..:......|:|  ::.::|:|...|.|    :...||.|.|     .|.......|.|.:..
Mouse    78 AVISRTMNRKMGKMMVKALSEEMGDTLEEG----SASPTSPDCS-----LDSPGPEKMALAFTEQ 133

  Fly   617 SVESLPSAS--GSSTQALVRPGSPHSSISAED-RTSMASCIC-KAKALVDSLPNPYDKEALKFKK 677
            .....||.|  .|:...|..||....|...|. ........| :|:...|..|:|||.::||.:|
Mouse   134 EEREPPSLSRQTSTGSELCSPGPGSGSFLEESPAPQYTGPFCGRARVHTDFTPSPYDHDSLKLQK 198

  Fly   678 GDLIDVLSMNASGIWKGRCHGRVGHFKFINVEVLPEQRMKNSSSKTLAAG----SRLANSGNGSH 738
            ||:|.::.....|.|.|..:|::|.||||.|:||||:          |.|    ||..:.|.   
Mouse   199 GDVIQIVEKPPVGTWLGLLNGKLGSFKFIYVDVLPEE----------AVGPVRPSRRQSKGK--- 250

  Fly   739 NGGPCSVEDLLIRIGLKEYTSVFVLNGYEDLELFKELEPADLDYLGILNQEHRAKLLTAVQLLHD 803
            ...|.::.:||.||||:|:||..:||||:.||.||||....|:.|.|::.:||||||||.:||  
Mouse   251 RPKPKTLHELLERIGLEEHTSTLLLNGYQTLEDFKELRETHLNELNIMDPQHRAKLLTAAELL-- 313

  Fly   804 IECSDVDIPGSSSENDEARLNNINMKHGASPFGRRHFPRDSGCYEGS 850
               .|.|..||....:.|..:...:.|..|. .:...||||||:|||
Mouse   314 ---LDYDTAGSEEAEEGAESSQEPVAHTVSE-PKVDIPRDSGCFEGS 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SKIPNP_001262827.1 SAM_Samd5 4..65 CDD:188926
SH3 657..710 CDD:473055 22/52 (42%)
SAM_superfamily 742..800 CDD:472832 31/57 (54%)
Sash3NP_001300678.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..76 11/62 (18%)
SLY 21..174 CDD:463602 33/164 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..168 20/80 (25%)
SH3_SASH3 176..231 CDD:212901 22/54 (41%)
SAM_superfamily 250..317 CDD:472832 34/74 (46%)
Blue background indicates that the domain is not in the aligned region.

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