DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SKIP and SASH1

DIOPT Version :9

Sequence 1:NP_001262827.1 Gene:SKIP / 42601 FlyBaseID:FBgn0051163 Length:1080 Species:Drosophila melanogaster
Sequence 2:XP_016866087.1 Gene:SASH1 / 23328 HGNCID:19182 Length:1410 Species:Homo sapiens


Alignment Length:1210 Identity:258/1210 - (21%)
Similarity:407/1210 - (33%) Gaps:410/1210 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DDLEICKQVGDPDLDAIGVENPAHRHKLLKSIRSLREKGAASVYFMLNDPNSLSGSM-------- 85
            :.|..|..|..|:::.   :||.|:.....|.....:....:.||..|...:..|.|        
Human   113 ESLGFCSAVSTPEVER---KNPLHKSNSEDSSVGKGDWKKKNKYFWQNFRKNQKGIMRQTSKGED 174

  Fly    86 ------EILCETPPNNELELVLREQLET---------------------------DGVRLTAHPY 117
                  ||........:|.::::|::.|                           ||    ::|.
Human   175 VGYVASEITMSDEERIQLMMMVKEKMITIEEALARLKEYEAQHRQSAALDPADWPDG----SYPT 235

  Fly   118 STPPSSC----LSDKEEDEIYGF---GYGVFAPRVARGGLTQQQQLLQQQTLQTQQSIQQQQQQM 175
            ....|:|    .||.|.:|...|   ...|.:.|..|..|.:.:::.:..|...::.:.:....:
Human   236 FDGSSNCNSREQSDDETEESVKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFENSPVL 300

  Fly   176 QQQQ------QQLPI-VPGQQQQGPHQHQ---TLPPNVAHLNF--------------VQQNCLSP 216
            .::.      .:.|: ..|..::.|....   |..|:.:.|:.              ..:..:.|
Human   301 DERSALYSGVHKKPLFFDGSPEKPPEDDSDSLTTSPSSSSLDTWGAGRKLVKTFSKGESRGLIKP 365

  Fly   217 --RSAYFYEFPPTAEGRETKKRTTLARLLKGLKTVNRRDRNNQQNGAQARAA----NDRLRHFQM 275
              :...|:.:|...:.::..:..|...:.|||.:::        :|......    |.|.||..:
Human   366 PKKMGTFFSYPEEEKAQKVSRSLTEGEMKKGLGSLS--------HGVSTDGVCFYDNHRRRHHLL 422

  Fly   276 INGGAGGQQHSFEETIHRLKVQEAMRKKEKFQREHEE--------ILRDIRQGL------LQMSR 326
            :         |.||.       :::||:.:.::....        ..|..|:|:      ||:.|
Human   423 V---------SLEEF-------QSVRKQIRLKKTDTNYSCSRAFLCQRPSRKGVTSTTCDLQLLR 471

  Fly   327 GEGRMDDTYMYDEALRTGGGMGIAGLGMPLGVGGNGGGGGAAHYAVSALHHQGHWYDEPPYESDP 391
            .:|:                                 |||                         
Human   472 QKGK---------------------------------GGG------------------------- 478

  Fly   392 DDFLMAGLNCGPAATIQGGRVRFSNNRESTGVISL------------------RSAGD--ISLPQ 436
                    :||    ..|.|||   .|.|....::                  |.|.|  :|..:
Human   479 --------SCG----FPGRRVR---GRTSVSEFNITYVVERSLYSHLNLTQLVRPASDRTLSKAE 528

  Fly   437 RGPPRRGLIVPQQPPN----------PPTIIPLTHARSHDRESGDYAGSISDLQSVTSRFSTVSI 491
            |...||.|:...:...          ...::...|.:|.....|.:        .:|:|  ::.:
Human   529 RQDLRRCLLEEDEEAKRKWAATVDRCTKRVLLRIHQKSRTCSFGGF--------DLTNR--SLHV 583

  Fly   492 GTNNCTARYRTLSGGIGESPSLSPSPSSDYEDIGVTRGHGCLPPSLLAAKAKKNGLPHGKANTIC 556
            |:||                       ||                           |.||.....
Human   584 GSNN-----------------------SD---------------------------PMGKEGDFV 598

  Fly   557 QKATVHHSGEMR-SSAKEIGAFNENGRNFVATKDTSRDFSNSQDNTDRG---------------S 605
            .|..:......| |..|::.:..|..|     |..|:.:|:|....|.|               .
Human   599 YKEVIKSPTASRISLGKKVKSVKETMR-----KRMSKKYSSSVSEQDSGLDGMPGSPPPSQPDPE 658

  Fly   606 MSDQAFACSASSVESLPSA-------SGSSTQALVRPGSPHSSISAED----RTSMASCIC-KAK 658
            ..|:....:..|||||.|:       ||.:........|...|:.:||    ........| :|:
Human   659 HLDKPKLKAGGSVESLRSSLSGQSSMSGQTVSTTDSSTSNRESVKSEDGDDEEPPYRGPFCGRAR 723

  Fly   659 ALVDSLPNPYDKEALKFKKGDLIDVLSMNASGIWKGRCHGRVGHFKFINVEVLPEQRMKNSSSKT 723
            ...|..|:|||.::||.||||:||::|....|.|.|..:.:||.||||.|:||.|...|....  
Human   724 VHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSEDEEKPKRP-- 786

  Fly   724 LAAGSRLANSGNGSHNGGPCSVEDLLIRIGLKEYTSVFVLNGYEDLELFKELEPADLDYLGILNQ 788
                :|....|....   |.||||||.||.|||:...|:.||||||:.||.||..|||.|.|.:.
Human   787 ----TRRRRKGRPPQ---PKSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDELNIRDP 844

  Fly   789 EHRAKLLTAVQLLHDIECSDVDIPGSSSENDEARLNNINMKHGASPFGRRHFPRDSGCYEGS--- 850
            ||||.|||||:||.:.: |:.|..||    .|..|.:.....|.|       ||||||||.|   
Human   845 EHRAVLLTAVELLQEYD-SNSDQSGS----QEKLLVDSQGLSGCS-------PRDSGCYESSENL 897

  Fly   851 --------PLPSSQTPTQAVNSTDESNSLDDVVTKCSSEIMKRVESARRCKDNPFKTTLPGGGRL 907
                    .|.|:::.|:....:...|.|.:..|   ..:||..::.::.::.         |||
Human   898 ENGKTRKASLLSAKSSTEPSLKSFSRNQLGNYPT---LPLMKSGDALKQGQEE---------GRL 950

  Fly   908 GKKSFLGGNGLMADDTLTRGGLSEKSSD-SGVSSSSLSSGPLKSSTXHLPTILAH--ELLLGVGS 969
            |     ||   :|.||       .||.| .||:.       |..:...||..:..  |.|.|..:
Human   951 G-----GG---LAPDT-------SKSCDPPGVTG-------LNKNRRSLPVSICRSCETLEGPQT 993

  Fly   970 GMGMGLGLGTMSHGTTGTLTPHGVATATSPTAHSAPLGNICNTLPHAPSSSGGGGVSSSMASNLP 1034
                 :.....||.........| |....||..:.|...|   :|..|..:     ::|.....|
Human   994 -----VDTWPRSHSLDDLQVEPG-AEQDVPTEVTEPPPQI---VPEVPQKT-----TASSTKAQP 1044

  Fly  1035 LNR-----NLVMLRNHLRKNTGGSITG---NGGVGASGVG 1066
            |.:     |.::|....|.:....:|.   .|.:.|||.|
Human  1045 LEQDSAVDNALLLTQSKRFSEPQKLTTKKLEGSIAASGRG 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SKIPNP_001262827.1 SAM_Samd5 4..65 CDD:188926 8/35 (23%)
SAM 7..65 CDD:197735 8/35 (23%)
SH3 657..710 CDD:302595 25/52 (48%)
SAM 738..801 CDD:197735 37/62 (60%)
SAM_superfamily 742..800 CDD:301707 37/57 (65%)
SASH1XP_016866087.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9367
eggNOG 1 0.900 - - E1_KOG4384
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40721
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.870

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