Sequence 1: | NP_001262822.1 | Gene: | how / 42596 | FlyBaseID: | FBgn0264491 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_071585.2 | Gene: | Khdrbs3 / 64015 | RGDID: | 620921 | Length: | 346 | Species: | Rattus norvegicus |
Alignment Length: | 354 | Identity: | 106/354 - (29%) |
---|---|---|---|
Similarity: | 162/354 - (45%) | Gaps: | 45/354 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRASLFQINGVKKEPLTLPEPEGSVVTMNEKVY 142
Fly 143 VPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEHLSDD 205
Fly 206 LHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAAF 270
Fly 271 SCVGSASYLYPAVCDEE---WRRLVAASDSRLLTSTGLPGLAAQIRAPAAAPLGAPLILNPRMT- 331
Fly 332 VPTTAASILSAQAAPTAAFDQT--------GHGMIFAPYDYANYAALAGNPLLT--EYADHSGAI 386
Fly 387 KQQ------RRLATNREH--PYQRATVGV 407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
how | NP_001262822.1 | STAR_dimer | 75..123 | CDD:293152 | 15/44 (34%) |
SF1_like-KH | 139..260 | CDD:239088 | 56/122 (46%) | ||
Khdrbs3 | NP_071585.2 | Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:O75525 | 1..160 | 64/164 (39%) | |
Qua1 | 4..53 | CDD:406639 | 16/55 (29%) | ||
KH-I_KHDRBS3 | 48..160 | CDD:411898 | 48/113 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 212..268 | 17/66 (26%) | |||
Sam68-YY | 266..320 | CDD:406871 | 6/53 (11%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 320..346 | 7/18 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5176 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |