Sequence 1: | NP_001262822.1 | Gene: | how / 42596 | FlyBaseID: | FBgn0264491 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001017045.1 | Gene: | khdrbs1 / 549799 | XenbaseID: | XB-GENE-479347 | Length: | 360 | Species: | Xenopus tropicalis |
Alignment Length: | 399 | Identity: | 116/399 - (29%) |
---|---|---|---|
Similarity: | 162/399 - (40%) | Gaps: | 120/399 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVR-------------ASLFQINGVKKEPLTLPE 129
Fly 130 PEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR 194
Fly 195 --GKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVP-------QAEGEDELKKRQLM 250
Fly 251 ELAIINGTYRDTT--------------AKSVAAFSCVGSASYLYPAVCDEEWRRLVAASDSRLLT 301
Fly 302 STGLPGLAAQIRA--------PAAAPLGAPLILNPRMTVPTTAASILSAQAAPTA--AFDQTGHG 356
Fly 357 MIFAPYDYAN----YAALAGNPLLTEYADH----------------------SGAIKQQRRL--A 393
Fly 394 TNREHPYQR 402 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
how | NP_001262822.1 | STAR_dimer | 75..123 | CDD:293152 | 16/57 (28%) |
SF1_like-KH | 139..260 | CDD:239088 | 59/129 (46%) | ||
khdrbs1 | NP_001017045.1 | Qua1 | 6..58 | CDD:406639 | 15/53 (28%) |
KH-I | 57..162 | CDD:412160 | 51/119 (43%) | ||
Sam68-YY | 282..331 | CDD:406871 | 10/51 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |