DRSC/TRiP Functional Genomics Resources

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Protein Alignment how and LOC4577011

DIOPT Version :10

Sequence 1:NP_001262822.1 Gene:how / 42596 FlyBaseID:FBgn0264491 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_061501179.1 Gene:LOC4577011 / 4577011 VectorBaseID:AGAMI1_010356 Length:478 Species:Anopheles gambiae


Alignment Length:280 Identity:86/280 - (30%)
Similarity:135/280 - (48%) Gaps:38/280 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEHL 202
            :|.||||:||.|||||::|||:|.:.|:|::||.||:.|.|||||||:|||:..|  |.|.:.||
Mosquito    57 RVQVPVRDHPKFNFVGKLLGPKGNSLKRLQEETMCKMAVLGKGSMRDRKKEEELRLSGDPRYAHL 121

  Fly   203 SDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIIN--------GTY 259
            |:||||.|:.......|..::|.|:|||::.|||  :..|::::.|:.|:..:|        |:.
Mosquito   122 SEDLHVEISTYTAPAEAHARIAYALAEVRRFLVP--DYHDDIRQEQMWEMQALNSQNATCNLGSA 184

  Fly   260 RDTTAK-----SVAAFSCVGSASYLYPAVCDEEWRRLVAASDSRLLTSTGLPGL--AAQIRAPAA 317
            .|.|..     :....|...|.|..............:..:...|...|||.|:  |||:.....
Mosquito   185 HDNTLNGGNGLTTNGMSISSSGSSCSTGSTGSTTNGTMPTNGGPLSNGTGLNGVVSAAQVVPNGV 249

  Fly   318 APLGAPLILNPRMTVPTTAASI-LSAQAAPTAAFDQTGHGMIFAPYDYANYAALAGNPLLTEYAD 381
            |.||..  .||..:||...:.: .:....|::...:..|                ....||.:..
Mosquito   250 AGLGTG--TNPSASVPGVGSELSTNGSTQPSSVVSELQH----------------VTSSLTHHQH 296

  Fly   382 HSGAIKQQRRLATNREHPYQ 401
            |....:||::..:.::..:|
Mosquito   297 HHSQQQQQQQQHSQQQQQHQ 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
howNP_001262822.1 STAR_dimer 75..122 CDD:435414
KH-I_HOW 132..236 CDD:411894 51/97 (53%)
LOC4577011XP_061501179.1 None
Blue background indicates that the domain is not in the aligned region.

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