DRSC/TRiP Functional Genomics Resources

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Protein Alignment how and qki2

DIOPT Version :9

Sequence 1:NP_001262822.1 Gene:how / 42596 FlyBaseID:FBgn0264491 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_021335713.1 Gene:qki2 / 393815 ZFINID:ZDB-GENE-040426-1462 Length:341 Species:Danio rerio


Alignment Length:350 Identity:176/350 - (50%)
Similarity:221/350 - (63%) Gaps:39/350 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QQQQSTQSIADYLAQLLKDRKQLAAFPN---VFTHVERLLDEEIARVRASLFQ--ING-VKKEPL 125
            :.::..:...|||.||:.|:|.:::.||   :|.|:||||||||.|||..::.  :|| ..|...
Zfish     6 ETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTS 70

  Fly   126 TLPEPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKE 190
            .||:..|.:..:.||:||||:|:||||||||||||||:||||||.||||||||||||||||||||
Zfish    71 ELPDAVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKE 135

  Fly   191 DANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAII 255
            :.||||||||||::||||||||||::|||.:||.:||.||:|||||.|||||.|||.|||||||:
Zfish   136 EQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200

  Fly   256 NGTYRDTTAKSVA-AFSCVGSASYLYPAVCDEEWRRLVAASDSRLLT--STGLPGLAAQIRAPAA 317
            ||||||...||.| |||...:                  |...|::|  :..:|..|.:..|| .
Zfish   201 NGTYRDANIKSPALAFSLAAT------------------AQAPRIMTGPTPVMPNAALRTPAP-T 246

  Fly   318 APLGAPLILNPRMTVPTTAASILSAQAAPTAA-FDQTGH-GMIFAPYDYANYAALAGNPLLTEYA 380
            ||...|||...:     |:|.:.:....|||. ..||.. |:|:|||||. ||......:|....
Zfish   247 APTLMPLIRQIQ-----TSALMPTGTPHPTATLLPQTPESGIIYAPYDYP-YALAPATSILEYPI 305

  Fly   381 DHS---GAIKQQRRLATNREHPYQR 402
            |.|   ||:..:.|....|.|||||
Zfish   306 DSSGVLGAVTTKVRRQDMRVHPYQR 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
howNP_001262822.1 STAR_dimer 75..123 CDD:293152 24/53 (45%)
SF1_like-KH 139..260 CDD:239088 99/120 (83%)
qki2XP_021335713.1 STAR_dimer 10..68 CDD:318695 24/57 (42%)
SF1_like-KH 83..205 CDD:239088 99/121 (82%)
PRK00708 139..299 CDD:331498 88/184 (48%)
Quaking_NLS 314..341 CDD:293159 6/16 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I4590
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 300 1.000 Inparanoid score I2664
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565749at2759
OrthoFinder 1 1.000 - - FOG0001806
OrthoInspector 1 1.000 - - otm25871
orthoMCL 1 0.900 - - OOG6_104884
Panther 1 1.100 - - LDO PTHR11208
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3450
SonicParanoid 1 1.000 - - X1339
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.950

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