Protein Alignment how and qkr58E-1

DIOPT Version :10

• Sequence 1: NP_001262822.1
• Gene: how / 42596
• FlyBaseID: FBgn0264491
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_523809.2
• Gene: qkr58E-1 / 37561
• FlyBaseID: FBgn0022986
• Length: 396
• Species: Drosophila melanogaster
• Alignment Length: 233
• Identity: 74/233 - (31%)
• Similarity: 125/233 - (53%)
• Gaps: 39/233 - (16%)

  Fly    41 AQAQAQQQQQAPQVV-VPMTPQ-----HLTPQQQQQSTQSIAD----YLAQLLKDRKQLAAFPNV 95
            |..:.:::.:.|... .|.||:     |.|.....:.|..:.:    ||.:.|.::|.|..
  Fly    14 ADYKRKRRDEEPAATGAPETPEADGGGHTTSHAALRDTPQLNEKTNAYLQECLLEKKTLEK---- 74

  Fly    96 FTHV--ERLLDEEIARVRASLFQINGVKKEPLTLPEPE-------GSVVTMNEKVYVPVREHPDF 151
             .|:  :||||:|:.::     .::|      .:|:||       ...:.:.:||..|::|:|.|
  Fly    75 -KHIITKRLLDDEVEKI-----LVSG------RIPKPEIYANVYSEKPIRVAQKVLFPIKEYPKF 127

  Fly   152 NFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEHLSDDLHVLITVED 214
            ||||:||||:|.|.:||::||.||::|.|:.||||..||:..|  |.|.:.|||.||||.|:...
  Fly   128 NFVGKILGPKGNTLRQLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPKYAHLSRDLHVEISTVA 192

  Fly   215 TENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMEL 252
            ....|..:::.|:.|::|.::|.|  .|:::..||.|:
  Fly   193 PPAEAYHRISYALGEIRKFMIPDA--NDDIRLEQLREM 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
how	NP_001262822.1	STAR_dimer	75..122	CDD:435414	12/52 (23%)
		KH-I_HOW	132..236	CDD:411894	45/105 (43%)
qkr58E-1	NP_523809.2	KH-I_KHDRBS	109..210	CDD:411812	44/100 (44%)