DRSC/TRiP Functional Genomics Resources

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Protein Alignment how and qkr58E-1

DIOPT Version :9

Sequence 1:NP_001262822.1 Gene:how / 42596 FlyBaseID:FBgn0264491 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster


Alignment Length:231 Identity:74/231 - (32%)
Similarity:126/231 - (54%) Gaps:35/231 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AQAQAQQQQQAPQVV-VPMTPQ-----HLTPQQQQQSTQSIAD----YLAQLLKDRKQLAAFPNV 95
            |..:.:::.:.|... .|.||:     |.|.....:.|..:.:    ||.:.|.::|.|.. .::
  Fly    14 ADYKRKRRDEEPAATGAPETPEADGGGHTTSHAALRDTPQLNEKTNAYLQECLLEKKTLEK-KHI 77

  Fly    96 FTHVERLLDEEIARVRASLFQINGVKKEPLTLPEPE-------GSVVTMNEKVYVPVREHPDFNF 153
            .|  :||||:|:.::     .::|      .:|:||       ...:.:.:||..|::|:|.|||
  Fly    78 IT--KRLLDDEVEKI-----LVSG------RIPKPEIYANVYSEKPIRVAQKVLFPIKEYPKFNF 129

  Fly   154 VGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEHLSDDLHVLITVEDTE 216
            ||:||||:|.|.:||::||.||::|.|:.||||..||:..|  |.|.:.|||.||||.|:.....
  Fly   130 VGKILGPKGNTLRQLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPKYAHLSRDLHVEISTVAPP 194

  Fly   217 NRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMEL 252
            ..|..:::.|:.|::|.::|.|  .|:::..||.|:
  Fly   195 AEAYHRISYALGEIRKFMIPDA--NDDIRLEQLREM 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
howNP_001262822.1 STAR_dimer 75..123 CDD:293152 12/51 (24%)
SF1_like-KH 139..260 CDD:239088 51/116 (44%)
qkr58E-1NP_523809.2 KH-I 109..210 CDD:412160 44/100 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460721
Domainoid 1 1.000 45 1.000 Domainoid score I3083
eggNOG 1 0.900 - - E1_COG5176
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1833
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D66954at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.800

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