DRSC/TRiP Functional Genomics Resources

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Protein Alignment how and KHDRBS2

DIOPT Version :10

Sequence 1:NP_001262822.1 Gene:how / 42596 FlyBaseID:FBgn0264491 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001337551.1 Gene:KHDRBS2 / 202559 HGNCID:18114 Length:366 Species:Homo sapiens


Alignment Length:397 Identity:113/397 - (28%)
Similarity:173/397 - (43%) Gaps:109/397 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRASLFQINGVK--KEPLTLPEPEGSVVTMNEK 140
            ||.:|:.::..|.  |: |.|..|||.|||.:.:.|    :|.|  :|...|.......:.::|:
Human     6 YLPELMAEKDSLD--PS-FVHASRLLAEEIEKFQGS----DGKKEDEEKKYLDVISNKNIKLSER 63

  Fly   141 VYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEHLS 203
            |.:||:::|.|||||::|||||.:.|:|::|||.|:.:.||||||||.||:..|  |:..:.|||
Human    64 VLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLS 128

  Fly   204 DDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDTTAKSVA 268
            |:|||||.|......|..:::.|:.|::|.|||  :..||:::.||.||:.:||:......:.:.
Human   129 DELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGSEDSGRGRGIR 191

  Fly   269 AFSCVGSASYLYPAVCDEEWRRLVAASDSR---------------LLTSTG---------LPGLA 309
            ....                 |:...:.||               :||..|         :|.:|
Human   192 GRGI-----------------RIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALPVPPVA 239

  Fly   310 AQIRAPAAAPLGAPLILNPRMTVPTTAASILSAQAAPTAAF--------------------DQT- 353
            ..:..|.|.  |||.:...|...|....:.....:.|.:.|                    ||| 
Human   240 RGVPTPRAR--GAPTVPGYRAPPPPAHEAYEEYPSLPLSLFFDTVAKSHQGYDDGYGGEYDDQTY 302

  Fly   354 --------------------GHGMIFAPYDYANYAALAGNPLLTEYADHSGAIK---QQRRLATN 395
                                |||:....||  :||.       .|:|....::|   |:......
Human   303 ETYDNSYATQTQSVPEYYDYGHGVSEDAYD--SYAP-------EEWATTRSSLKAPPQRSARGGY 358

  Fly   396 REHPYQR 402
            |||||.|
Human   359 REHPYGR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
howNP_001262822.1 STAR_dimer 75..122 CDD:435414 16/45 (36%)
KH-I_HOW 132..236 CDD:411894 48/105 (46%)
KHDRBS2NP_001337551.1 Qua1 5..57 CDD:465079 18/57 (32%)
KH-I_KHDRBS2 54..171 CDD:411897 52/118 (44%)
Sam68-YY 288..338 CDD:465182 10/58 (17%)

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