Protein Alignment how and F54D1.1

DIOPT Version :9

• Sequence 1: NP_001262822.1
• Gene: how / 42596
• FlyBaseID: FBgn0264491
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_502114.1
• Gene: F54D1.1 / 186227
• WormBaseID: WBGene00010046
• Length: 278
• Species: Caenorhabditis elegans
• Alignment Length: 257
• Identity: 66/257 - (25%)
• Similarity: 106/257 - (41%)
• Gaps: 80/257 - (31%)

  Fly    78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRASLFQ-------------------------I 117
            ||.:|:.:.:||:..|....:...||.:||::|...|::                         .
 Worm     9 YLNELINEMRQLSETPIDCKNARMLLSKEISKVFDELYRHGQGFIDNGYGSDYNKNDFYSPHSAN 73

  Fly   118 NGVKKEPL----TLPEP-------EGSVVT----------------------------MNEKVYV 143
            :|....|.    :||..       ..|.:|                            :..|||:
 Worm    74 SGYSASPFPSRPSLPNHALSTSFYHNSFMTPIRNGRMRSPDQDLGDWSREKINDTQHVLQTKVYI 138

  Fly   144 PVREHP--------DFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWE 200
            |  |.|        ..|::||||||.||:|:.:|.:....:::||.||:|:|..::..| |.| |
 Worm   139 P--EPPVSIDGKKVKCNYIGRILGPSGMSARMIENQYDVTLLIRGAGSVRNKAMDERVR-KRN-E 199

  Fly   201 HLSDDLHVLITVEDTENRATVKLAQAVAE-VQKLLVPQAEGEDELKKRQLMELAIINGTYRD 261
            ||.:.||||:.....:.....::....|| ::.||.|.   .||.|..||:..|.:||||::
 Worm   200 HLEEPLHVLLIARHNDKTKCEEILNKAAEKIESLLTPI---HDEYKMDQLVSYAKMNGTYQE 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
how	NP_001262822.1	STAR_dimer	75..123	CDD:293152	13/69 (19%)
		SF1_like-KH	139..260	CDD:239088	47/129 (36%)
F54D1.1	NP_502114.1	SF1_like-KH	133..257	CDD:239088	47/130 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5176
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11208
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	5	4.870