DRSC/TRiP Functional Genomics Resources

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Protein Alignment how and Y69A2AR.32

DIOPT Version :9

Sequence 1:NP_001262822.1 Gene:how / 42596 FlyBaseID:FBgn0264491 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_741340.2 Gene:Y69A2AR.32 / 177042 WormBaseID:WBGene00022101 Length:384 Species:Caenorhabditis elegans


Alignment Length:391 Identity:116/391 - (29%)
Similarity:174/391 - (44%) Gaps:113/391 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 DEEIARVRA-----SLFQING--VKKEPLT--LPEPE----------------GSVVTMNEKVYV 143
            |:::|:..:     :|.|:.|  ::..|.|  ..|||                ..|||::|.:.|
 Worm    13 DQKLAQSESGVELKTLLQLIGKAIEAAPATDEPAEPELPRFMRNNDNYHDQRRQFVVTLSEILMV 77

  Fly   144 PVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKED-ANRGKPNWEHLS---- 203
            ||.::|.:|||||||||||||.||||:||||:|.|||:.|......|. .|:..|::...|    
 Worm    78 PVEKYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRASTTASNPESKPNKSTPSFSKPSLSII 142

  Fly   204 -------DDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRD 261
                   :.|||.|..:||::.|..|:|.||..:|:||.|..:|:||||::||:::::||||||.
 Worm   143 SRNALTEEPLHVYIECQDTQSAAQAKMAHAVEVIQRLLSPPKDGKDELKRQQLVDISLINGTYRV 207

  Fly   262 TTAKSVAAFSCVGSASYLYPAVCDEEWRRLVAASDS---------RLLTSTG-------LPGLAA 310
            |:..:    ..||            ::||...::|.         |.|.:.|       :.|:|.
 Worm   208 TSTSN----EHVG------------QFRRPRYSADPTSNSTDLQLRPLDAHGAYGDVGSVYGIAQ 256

  Fly   311 QIRAPAAAPLGAPLILNPRMTVPTTAASILS----------AQAAPTAAFDQTGHGMIFAPYD-- 363
            |.|. ...|.|      |..|....|.|:.|          .:.:|..|.|     .||:..|  
 Worm   257 QKRI-WQKPRG------PDATSEEFAHSVSSREFVTDIVHKTKNSPRRAND-----AIFSLTDEI 309

  Fly   364 -----YANYAALAGNPLLTEYADHSGAIKQQRRL----------ATNREHPYQRATVGVPAKPAG 413
                 .|....||.:.|||     .|...||:.:          ::.:..||....:..|..|.|
 Worm   310 VNDSLKAAQTLLASHELLT-----FGLQDQQKMMKVTQYGAGDTSSRKNLPYPPPLMSTPMPPPG 369

  Fly   414 F 414
            :
 Worm   370 Y 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
howNP_001262822.1 STAR_dimer 75..123 CDD:293152 5/25 (20%)
SF1_like-KH 139..260 CDD:239088 61/132 (46%)
Y69A2AR.32NP_741340.2 SF1_like-KH 72..206 CDD:239088 61/133 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D500652at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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