Protein Alignment how and Sf1

DIOPT Version :9

• Sequence 1: NP_001262822.1
• Gene: how / 42596
• FlyBaseID: FBgn0264491
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: XP_038936270.1
• Gene: Sf1 / 117855
• RGDID: 620645
• Length: 641
• Species: Rattus norvegicus
• Alignment Length: 457
• Identity: 104/457 - (22%)
• Similarity: 177/457 - (38%)
• Gaps: 134/457 - (29%)

  Fly    37 AQAQAQAQAQQQQQAPQVVVPMTPQHLTP---QQQQQSTQSIADYLAQL-LKD--RK----QLAA 91
            ::.:.:::..|.....:.|:|..|..:.|   ::|:::      |:.|| ::|  ||    .|..
  Rat    16 SKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERA------YIVQLQIEDLTRKLRTGDLGI 74

  Fly    92 FPN----------VFT-----------HVERLLDEEIARVRASLFQINGVKKEPLTLPEPEGSVV 135
            .||          ::.           ...:.|:||...:...:..:|...|.|.....|   ..
  Rat    75 PPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPP---AT 136

  Fly   136 TMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWE 200
            .:::||.:|..|:|:.||||.::||||.|.|.:|:|...|||:|||||:::.|.     |:.:.:
  Rat   137 RVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKV-----GRKDGQ 196

  Fly   201 HL---SDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTY 259
            .|   .:.||.|:|....||     :.:||.:::.:|   :...|.:::|:|.||.|||.:|||.
  Rat   197 MLPGEDEPLHALVTANTMEN-----VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTL 256

  Fly   260 RDTTAKSVAAFSCVGSASYLYPAVC------------------------------DEEWRRLVAA 294
            |:...:.:..:....:.|.....||                              |:|:..|:|.
  Rat   257 REDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAE 321

  Fly   295 SDSRLLTSTGLPGLAAQIRAPAAAPLGAPLILNPRMTVPTT---AASILS-AQAAPTAAFDQTGH 355
                 |....:|........||..||.:.    ||...|.:   ..|::| .|:.|.
  Rat   322 -----LGEAPVPASVGSTSGPATTPLASA----PRPAAPASNPPPPSLMSTTQSRPP-------- 369

  Fly   356 GMIFAPYDYANYAALAG--------------NPLLTEYADHSGAIKQQRRLATNREHPYQRATVG 406
            .|...|.:...|..:.|              :||.:....|.|             ||.|....|
  Rat   370 WMNSGPSENRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGG-------------HPMQHNPNG 421

  Fly   407 VP 408
            .|
  Rat   422 PP 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
how	NP_001262822.1	STAR_dimer	75..123	CDD:293152	13/75 (17%)
		SF1_like-KH	139..260	CDD:239088	48/126 (38%)
Sf1	XP_038936270.1	MSL5	19..259	CDD:227503	71/258 (28%)
		ZnF_C2HC	280..295	CDD:197667	2/14 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5176
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810