Protein Alignment how and khdrbs3

DIOPT Version :9

• Sequence 1: NP_001262822.1
• Gene: how / 42596
• FlyBaseID: FBgn0264491
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: XP_002932263.1
• Gene: khdrbs3 / 100379996
• XenbaseID: XB-GENE-941483
• Length: 342
• Species: Xenopus tropicalis
• Alignment Length: 377
• Identity: 109/377 - (28%)
• Similarity: 160/377 - (42%)
• Gaps: 91/377 - (24%)

  Fly    78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRASLFQINGVKKEPLTLPEPEGSVVTMN---- 138
            ||.|||.::..|.  |: |||..|::.|||.:::         |.|..|..:....|:..|
 Frog     4 YLPQLLAEKDALD--PS-FTHALRMVKEEIEKLQ---------KGEDNTEDQYIDVVINKNMKLA 56

  Fly   139 EKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR--GKPNWEH 201
            :||.:|:::.|.|||||::|||||.:.|:|:::|..|:.:.||||||||.||:..|  |:..:.|
 Frog    57 QKVLIPIKQFPKFNFVGKLLGPRGNSLKRLQEDTLTKMSILGKGSMRDKAKEEELRKSGEAKYYH 121

  Fly   202 LSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDTTAKS 266
            |:|||||||.|......|..::..|:.|::|.|:|  :..||:::.||.||..:||....|.|..
 Frog   122 LNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNGGPETTEAPV 184

  Fly   267 VAAFSCVGSASYLYPAVCDEEWRRLVAASDSRLLTSTGLP-GLAAQIRAPAAAPLGAPLILNPRM 330
            |.....:.:.....||                      || |......||...|.|||.   ||.
 Frog   185 VRGKPSIRARGVPVPA----------------------LPRGRGGVPPAPTGVPRGAPA---PRG 224

  Fly   331 TVPTTAASILS-------AQAAPTAA--------------FD-QTGHGMIF-------------- 359
            ..|...:|..:       |:..|..|              :| ..|:|..:
 Frog   225 VTPARVSSARARGLVATRARGIPPPAGYRPPPPVQDTYGEYDYDDGYGTAYDEQSYDSYDNNYNS 289

  Fly   360 ---APYDYANYAALAGNPLLTEYADHSGAIKQQRR------LATNREHPYQR 402
               :..||.:|....|......|.....|..:.:.      ..|.||.||.|
 Frog   290 QGQSTADYYDYGHGLGEDSYDSYGQEDWANSRHKAPPARACKGTYREQPYAR 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
how	NP_001262822.1	STAR_dimer	75..123	CDD:293152	15/44 (34%)
		SF1_like-KH	139..260	CDD:239088	54/122 (44%)
khdrbs3	XP_002932263.1	Qua1	3..52	CDD:374463	18/59 (31%)
		SF1_like-KH	57..176	CDD:239088	53/120 (44%)
		PHA03381	<193..>233	CDD:177618	14/64 (22%)
		Sam68-YY	262..316	CDD:374636	8/53 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910