DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pit and AT5G63630

DIOPT Version :10

Sequence 1:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_201168.3 Gene:AT5G63630 / 836483 AraportID:AT5G63630 Length:716 Species:Arabidopsis thaliana


Alignment Length:645 Identity:185/645 - (28%)
Similarity:321/645 - (49%) Gaps:110/645 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SKKHVAKDEDDDLEEDFQEAPLPKKKQQKQPPKKQ-------------------QIQVANSDSE- 96
            |.:.:.|.:|:| |||....    :.|:|:..:.|                   :||..:|::. 
plant    96 SSRGILKSDDED-EEDRSRG----RNQEKRGIRNQVDSFRNKRYGGDRERGFNSRIQGKSSEASF 155

  Fly    97 ------SDDDEQEDE-----------ADEDSDLDEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPA 144
                  |...::|||           .||.|| ::|..:...|:.....:||::||:|.:     
plant   156 RGRKETSFSRDREDEKGLRKREDLRLEDESSD-EDVKSLVMGDIGDLLSEDDEEEDQDYD----- 214

  Fly   145 KKTKLLPNKSKAQNGKPAKDDEPFTVESSLAALDYRDSDDRSFASLK---GAVSEATLRAIKEMG 206
                .|..|:.:..|        |..|:.:.|...|:::|......:   ..:|..:|:|||:.|
plant   215 ----FLKKKAVSAFG--------FDKENVIEADKTRNANDSYLTKTRFDHYPLSPLSLKAIKDAG 267

  Fly   207 FTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELI---------NKLRFMPRNGTGV 262
            :..||.:|..:|..:|||:|::..|:||:|||:|||:|::|::         ||     |.....
plant   268 YETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDNK-----RPPILA 327

  Fly   263 IIISPTRELSMQTFGVLKELMAHHHHTYG--LVMGGSNRQVESEKLGKG-INILVATPGRLLDHL 324
            ::|.|||||:.|.......|: .:|.:.|  :|:||:...:|.:::... ..|||||||||.||:
plant   328 LVICPTRELANQAATEANTLL-KYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHI 391

  Fly   325 QNSPDFL--YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSATQTARIEALSKLAL 387
            :|:|.|.  .|.::.|::||.|.:|::||.:::::||:.:||.|||.|||||....:..:..:||
plant   392 ENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVAL 456

  Fly   388 KSEPIYVG-VHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKK----NRKKKVMVFFSSCMSVK 447
            :.:..:|. ||:. ...|...:.|.:::...::...:|:|.|::    |...||:||.::.|..|
plant   457 RRDHEFVNCVHEG-TIETHQQVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTK 520

  Fly   448 YHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPD 512
            ...:|...::|.|..||.::.|:.||....:|..::..||:.:||:|||:|.|.|..::|...|.
plant   521 LVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPK 585

  Fly   513 DPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLK---AAKVPLNEFEFSWQKIADIQLQLE 574
            |..:||||:|||.| .|..|..:||:.|.|..||..||   ..|.||...:  .:.:..:|..|.
plant   586 DREQYIHRLGRTGR-KGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSID--PETVKKVQKALC 647

  Fly   575 KLIAKNYFLNQSAKEAFKSYVRAY-----DSHQLKQIFNVNTLDLQAVAKSFGFLVPPVV 629
            .:..:|   .::|.:|:..|..:.     |..:|.::.|       ..::|.|...||.:
plant   648 HVEMRN---KEAAYQAWLGYYNSQKMIGRDKDRLVELAN-------EFSRSMGLDNPPAI 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 77/210 (37%)
SF2_C_DEAD 408..537 CDD:350174 43/132 (33%)
DUF4217 570..627 CDD:464056 11/61 (18%)
AT5G63630NP_201168.3 PRK12678 <54..>202 CDD:237171 23/111 (21%)
SrmB 247..644 CDD:440279 136/406 (33%)

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