DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pit and DDX24

DIOPT Version :9

Sequence 1:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_065147.1 Gene:DDX24 / 57062 HGNCID:13266 Length:859 Species:Homo sapiens


Alignment Length:720 Identity:176/720 - (24%)
Similarity:302/720 - (41%) Gaps:211/720 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PSKKPEKLSKKHVAKDE----DDDLEEDFQEAPLPKKKQQKQPPKKQQIQVANSDSESDDDEQED 104
            |:|.|..|..|...|.:    .::.||:..::..||||.:.:..|....:..::..|.:..:.|.
Human    61 PAKNPSSLFSKEAPKRKAQAVSEEEEEEEGKSSSPKKKIKLKKSKNVATEGTSTQKEFEVKDPEL 125

  Fly   105 EADEDSDLDEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNG-KPAKDDE-- 166
            ||..|   |.|.    :|.::|     :...|:..:..|.||      |:|.:.| :|::...  
Human   126 EAQGD---DMVC----DDPEAG-----EMTSENLVQTAPKKK------KNKGKKGLEPSQSTAAK 172

  Fly   167 -PFTVESSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGR-DLVG 229
             |...::.:..:..:.:|..::..|  .|....|||:..:||:..|.||:.:|.|.::.: |::|
Human   173 VPKKAKTWIPEVHDQKADVSAWKDL--FVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILG 235

  Fly   230 AAQTGSGKTLAFLIPAVELINKLRFMPRN------------------------------------ 258
            ||:|||||||||.||.:..:  |::..||                                    
Human   236 AAETGSGKTLAFAIPMIHAV--LQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDAL 298

  Fly   259 ---------------------------------------GTGV---------------------- 262
                                                   |.|.                      
Human   299 PDDTVIESEALPSDIAAEARAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDK 363

  Fly   263 ---------------------------IIISPTRELSMQTFGVLKELMAHHHHT---YGLVMGGS 297
                                       ::::|||||::|   |.:.:.|....|   ..:::||.
Human   364 EQTGNLKQELDDKSATCKAYPKRPLLGLVLTPTRELAVQ---VKQHIDAVARFTGIKTAILVGGM 425

  Fly   298 NRQVESEKLGKGINILVATPGRLLD-------HLQNSPDFLYKNLQCLIIDEVDRILEIGFEEEL 355
            :.|.:...|.:...|:|||||||.:       ||:|     .:.|:||::||.||::|.|...||
Human   426 STQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRN-----LRQLRCLVVDEADRMVEKGHFAEL 485

  Fly   356 KQIINLL------PKRRQTMLFSAT---------------------QTARIEAL-SKLALKSEPI 392
            .|::.:|      || |||::||||                     :||:::.| .|:.::.:|.
Human   486 SQLLEMLNDSQYNPK-RQTLVFSATLTLVHQAPARILHKKHTKKMDKTAKLDLLMQKIGMRGKPK 549

  Fly   393 YVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYID 457
            .:.:..|:  |||:.|.:..|.|.::::...|:.||.:...:. :||.:|...:|....|...:|
Human   550 VIDLTRNE--ATVETLTETKIHCETDEKDFYLYYFLMQYPGRS-LVFANSISCIKRLSGLLKVLD 611

  Fly   458 LPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVG 522
            :...::|....|.:|.....||...|..:||.|||||||||||:|..::.|..|.....|:||.|
Human   612 IMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSG 676

  Fly   523 RTARGSGTSGHALLLMRPEE-LGFLRYLKAAK----VPLNEFEFSWQKIADIQLQLEKLIAKNYF 582
            ||||.: ..|.:|:|:.||: :.|.:..|..|    :||...:..:..:...:::|.:.|.|:.:
Human   677 RTARAT-NEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEY 740

  Fly   583 LNQSA 587
            .|..|
Human   741 RNFQA 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_001287459.1 SrmB 186..677 CDD:223587 144/570 (25%)
DEADc 187..394 CDD:238167 83/369 (22%)
HELICc 408..537 CDD:238034 44/128 (34%)
DUF4217 569..627 CDD:290667 5/19 (26%)
DDX24NP_065147.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..170 30/126 (24%)
SrmB 191..783 CDD:223587 144/572 (25%)
Q motif 192..220 9/29 (31%)
P-loop_NTPase 194..511 CDD:304359 78/329 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..300 1/37 (3%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..376 2/49 (4%)
DEAD box 471..474 2/2 (100%)
Helicase_C 573..681 CDD:278689 38/108 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 799..859
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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