DRSC/TRiP Functional Genomics Resources

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Protein Alignment pit and CG9630

DIOPT Version :10

Sequence 1:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster


Alignment Length:549 Identity:190/549 - (34%)
Similarity:285/549 - (51%) Gaps:72/549 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 RSFASL-KGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVEL 248
            :.::|| |..:|:|.|:.::..||.:||.:|:.::..||..:|:...|.||||||||||:|.:|:
  Fly     4 KKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEI 68

  Fly   249 INKLR----FMPRNGTGVIIISPTRELSMQTFGVLKELMAH---HHHTYGLVMGGSNRQVESEKL 306
            :.:..    :.|:. .|.::|||||||:.|...||.:.:.|   .|....|::||::.:.:...|
  Fly    69 LQRRHKETPWGPKE-IGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATL 132

  Fly   307 GKGIN-ILVATPGRLLDHLQNSPDFL-----YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKR 365
            .:... |||.|||||.|..|...|.|     .|:|:.|::||.||:|::||:..:..|:..||::
  Fly   133 RRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQ 197

  Fly   366 RQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKK 430
            |:|.|||||||..:..|.:..|:: |:.|.|.:.....|...|:..|.:...|.:.:.|..||..
  Fly   198 RRTGLFSATQTTEVTDLIRAGLRN-PVLVSVKEKASVNTPARLQNFYRIVEPELKFVALLEFLSS 261

  Fly   431 NRK--KKVMVFFSSCMSVKYHHELFNYIDLP---VTSIHGKQKQTKRTTTFFQFCNAESGILLCT 490
            ...  .||||||.:|..|:|..|....: ||   |..||||.| .||.....:|.|....:||||
  Fly   262 PATVIGKVMVFFPTCACVEYWAEALPPL-LPKRTVLGIHGKMK-NKRANVVEKFRNTPQAVLLCT 324

  Fly   491 DVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKA-AKV 554
            ||.|||||:|:::|:||:|||.....::|||||||| .|..|:||:.:.|.|..::.:||. .||
  Fly   325 DVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTAR-QGNEGNALVFLLPSEDAYVHFLKINQKV 388

  Fly   555 PLNEF--------EFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNT 611
            .|.:.        :...:|:..:..||.:|.|.:..:......||.|:||||..|:...|..:..
  Fly   389 ELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKD 453

  Fly   612 LDLQAVAKSFGFLVPPVVDLKVGAAKRERPE-KRVGGGGF---GF------------------YK 654
            |||..:|.::|.|..|           ..|| |...|||:   .|                  .|
  Fly   454 LDLGKMATAYGLLQLP-----------RMPELKNYQGGGYVAPAFEVDLSKLTYKNAQKEQVRQK 507

  Fly   655 KM----NEGS-ASKQRHFKQVNR-DQAKK 677
            ||    ..|| ..:::|.|:|.. ||.||
  Fly   508 KMETYEQTGSWPGQKQHKKRVESWDQTKK 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 77/209 (37%)
SF2_C_DEAD 408..537 CDD:350174 58/133 (44%)
DUF4217 570..627 CDD:464056 19/56 (34%)
CG9630NP_649777.1 DEADc_DDX55 18..226 CDD:350718 77/209 (37%)
SF2_C_DEAD 239..371 CDD:350174 58/134 (43%)
DUF4217 414..470 CDD:464056 20/66 (30%)

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