Protein Alignment pit and Rm62

DIOPT Version :9

• Sequence 1: NP_001287459.1
• Gene: pit / 42595
• FlyBaseID: FBgn0266581
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Alignment Length: 714
• Identity: 165/714 - (23%)
• Similarity: 283/714 - (39%)
• Gaps: 192/714 - (26%)

  Fly    39 QNGNKPSKKPEKLSKKHVAKDEDDDLEEDFQEAPLPKKKQQKQPPKKQQIQVANSDSESDDDEQE 103
            |...:.|.||          |.||.::.      :||.:|:.:..|         ...:|.||:.
  Fly    97 QRAFRDSSKP----------DSDDYVDS------IPKAEQRTRTRK---------SLFNDPDERT 136

  Fly   104 DE-------ADEDSDLDEVAEVDEEDVDSGSED----------------------------DDQQ 133
            :|       |..|.|...... .....|.|.:|                            :.::
  Fly   137 EEIKIEGVMAPHDRDFGHSGR-GGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRR 200

  Fly   134 EDE----------------------DEEEPV-PAKKTKLLPNKSKAQNGKP-AKDDEPFTVESSL 174
            :|.                      .::.|: |...:.|.|.|.......| ..:..|:.|:.
  Fly   201 DDRGGGNRFGGGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQR-- 263

  Fly   175 AALDYRDSDDRSFASLKGAV-------SEA-----TLRAIKEMGFTEMTEIQSKSLTPLLKGRDL 227
                ||:..:   .:::|.|       ||.     .::.|:..|:...|.||::.....:.|.:.
  Fly   264 ----YREEQE---ITVRGQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNF 321

  Fly   228 VGAAQTGSGKTLAFLIPAVELINKLRFMPR-NGTGVIIISPTRELSMQTFGVLKELMAHHHHTYG 291
            ||.|:|||||||.:::||:..||..:.:.| :|...::::|||||:.|...|..|..:..:....
  Fly   322 VGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNT 386

  Fly   292 LVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELK 356
            .|.||:.:..:...|.:|..|::||||||:|.|......| |....|::||.||:|::|||.:::
  Fly   387 CVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNL-KRCTYLVLDEADRMLDMGFEPQIR 450

  Fly   357 QIINLLPKRRQTMLFSATQTARIEALSKLALKSEPIYVGVH-DNQDTATVDGLEQGYIVC---PS 417
            :|::.:...|||:::|||....::.|::..|.:   |:.:: .:.:.:....:.|...||   ..
  Fly   451 KIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGN---YIQINIGSLELSANHNIRQVVDVCDEFSK 512

  Fly   418 EKRLLVLFTFLKKNRKK--KVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFC 480
            |::|..|.:.:....:.  |:::|..:...|...........:...:|||.:.|::|.....:|.
  Fly   513 EEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFR 577

  Fly   481 NAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGF 545
            :.:|.||:.|||||||||:..:.:::.:|.|.:..:||||:|||.| |.|.|.:........
  Fly   578 SGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGR-SNTKGTSFAFFTKNN--- 638

  Fly   546 LRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVR--AYDSHQLKQIFN 608
               .|.||.           :.|:..:          .||....|.::..|  .||
  Fly   639 ---AKQAKA-----------LVDVLRE----------ANQEINPALENLARNSRYD--------- 670

  Fly   609 VNTLDLQAVAKSFGFLVPPVVDLKVGAAKRER-----PEKRVGGGGFGFYKKMNEGSASKQRHF 667
                                     |...|.|     ...|.|||||      .:||.|..|.|
  Fly   671 -------------------------GGGGRSRYGGGGGGGRFGGGGF------KKGSLSNGRGF 703

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pit	NP_001287459.1	SrmB	186..677	CDD:223587	133/508 (26%)
		DEADc	187..394	CDD:238167	68/219 (31%)
		HELICc	408..537	CDD:238034	40/133 (30%)
		DUF4217	569..627	CDD:290667	6/59 (10%)
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	113/407 (28%)
		DEADc	283..488	CDD:238167	67/208 (32%)
		HELICc	499..633	CDD:238034	40/134 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451765
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840