Sequence 1: | NP_001287459.1 | Gene: | pit / 42595 | FlyBaseID: | FBgn0266581 | Length: | 680 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_954550.1 | Gene: | Ddx24 / 373065 | RGDID: | 727929 | Length: | 851 | Species: | Rattus norvegicus |
Alignment Length: | 703 | Identity: | 173/703 - (24%) |
---|---|---|---|
Similarity: | 293/703 - (41%) | Gaps: | 184/703 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 KKPEKL-----SKKHVAKDEDDDLEEDFQEAPLPKKKQQKQPPKKQQIQVANSDSESDDDEQEDE 105
Fly 106 ADEDSDLDEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPAKDDEPFTV 170
Fly 171 ESSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGR-DLVGAAQTG 234
Fly 235 SGKTLAFLIPAVELINKLRFM------------PRNG---------------------------- 259
Fly 260 ----TGV---------------------------------------------------------- 262
Fly 263 --------------IIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINIL 313
Fly 314 VATPGRLLD-------HLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLL-----PKRR 366
Fly 367 QTMLFSAT---------------------QTARIEAL-SKLALKSEPIYVGVHDNQDTATVDGLE 409
Fly 410 QGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTT 474
Fly 475 TFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMR 539
Fly 540 PEE-LGFLRYLKAAK----VPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSA 587 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pit | NP_001287459.1 | SrmB | 186..677 | CDD:223587 | 141/558 (25%) |
DEADc | 187..394 | CDD:238167 | 79/357 (22%) | ||
HELICc | 408..537 | CDD:238034 | 46/128 (36%) | ||
DUF4217 | 569..627 | CDD:290667 | 5/19 (26%) | ||
Ddx24 | NP_954550.1 | SrmB | 191..735 | CDD:223587 | 139/554 (25%) |
P-loop_NTPase | 194..505 | CDD:304359 | 74/317 (23%) | ||
Helicase_C | 567..675 | CDD:278689 | 40/108 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D973872at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |