DRSC/TRiP Functional Genomics Resources

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Protein Alignment pit and me31B

DIOPT Version :9

Sequence 1:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_523533.2 Gene:me31B / 34364 FlyBaseID:FBgn0004419 Length:459 Species:Drosophila melanogaster


Alignment Length:453 Identity:120/453 - (26%)
Similarity:208/453 - (45%) Gaps:50/453 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 KSKAQNGKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKS 217
            |||.:  .|.||:...|.:    ..|.|.::...|     .:....|..|.|.|:...:.||..:
  Fly    35 KSKLK--LPPKDNRFKTTD----VTDTRGNEFEEF-----CLKRELLMGIFEKGWERPSPIQEAA 88

  Fly   218 LTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKEL 282
            :...|.|:|::..|:.|:|||.|:.||.:|.|:.    .::....:::.|||||::||..:..||
  Fly    89 IPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDP----TKDYIQALVMVPTRELALQTSQICIEL 149

  Fly   283 MAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRIL 347
            ..|......:..||:..:.:..::.:.:.:::|||||:|| |.:.......:.:.|::||.|::|
  Fly   150 AKHLDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILD-LMDKKVADMSHCRILVLDEADKLL 213

  Fly   348 EIGFEEELKQIINLLPKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGY 412
            .:.|:..|..:|..|||..|.:|||||....::...:..|: ||..:.:   .:..|:.|:.|.|
  Fly   214 SLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLR-EPYEINL---MEELTLKGVTQYY 274

  Fly   413 IVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFF 477
            ......:::..|.|...|.:..:.::|.:|...|:...:....:......||.|..|..|...|.
  Fly   275 AFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFH 339

  Fly   478 QFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE- 541
            .|.......|:|:|:..||:|:..|:.::.:|.|.....|:||:||:.| .|..|.|:.|:..| 
  Fly   340 DFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGR-FGHLGIAINLITYED 403

  Fly   542 ---------ELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIA------KNYFLNQSAKE 589
                     |||    .:...:|         |:.|..|.:..:.|      .|..||.||.|
  Fly   404 RFDLHRIEKELG----TEIKPIP---------KVIDPALYVANVGASVGDTCNNSDLNNSANE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_001287459.1 SrmB 186..677 CDD:223587 111/420 (26%)
DEADc 187..394 CDD:238167 60/206 (29%)
HELICc 408..537 CDD:238034 33/128 (26%)
DUF4217 569..627 CDD:290667 8/27 (30%)
me31BNP_523533.2 PTZ00424 60..422 CDD:185609 100/380 (26%)
DEADc 60..260 CDD:238167 60/210 (29%)
HELICc 270..398 CDD:238034 33/128 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451591
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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