DRSC/TRiP Functional Genomics Resources

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Protein Alignment pit and Dbp80

DIOPT Version :10

Sequence 1:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:439 Identity:108/439 - (24%)
Similarity:202/439 - (46%) Gaps:54/439 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 EDSDLDEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKA-QNGKPAKDDEPFTVE 171
            ||.::.::.:....|..||.|.|....|       ||:.:.|:....|. .|.|.:.|.:.....
  Fly     9 EDQEVSKLVDKLNLDSKSGEETDFDVAD-------PAETSLLIKILGKGLVNTKLSLDIQQKNPN 66

  Fly   172 SSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKG--RDLVGAAQTG 234
            |.|.::       ::|.:|.  :..:.|:.|..|||...::||..:|..||..  ::::..:|:|
  Fly    67 SPLHSV-------KTFEALH--LKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSG 122

  Fly   235 SGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNR 299
            :|||.||::..:..:|.....|:    |:.:|||.||::|| |.:...|........|.......
  Fly   123 TGKTAAFVLAMLSRVNVCLNHPQ----VLCLSPTYELAIQT-GEVAARMGQFCREIKLRFAVRGE 182

  Fly   300 QVE-SEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVD-RILEIGFEEELKQIINLL 362
            :|: |:|:.:  :||:.|||:|||.......|..|.:...::||.| .|...|..::..:|..:|
  Fly   183 EVDRSKKIEE--HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKML 245

  Fly   363 PKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTF 427
            ....|.:.||||....:...::| :.::|..:.:...::  :::.::|.|:.|.:|:.       
  Fly   246 NPHCQMLFFSATYGKEVMDFARL-IVADPTIIRLMREEE--SLENIKQYYVKCKNEEG------- 300

  Fly   428 LKKNRKKKVMVFFSSCMSVKYHH--ELFNYIDLPVTS-------IHGKQKQTKRTTTFFQFCNAE 483
             |.|..:.:....|...::.:.|  ....::...:||       :.|.....:|.....:|.:..
  Fly   301 -KYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGL 364

  Fly   484 SGILLCTDVAARGLDIPQVDWIVQYDPP------DDPREYIHRVGRTAR 526
            ..:|:.|::.:||:||.||..:|.:|.|      .|...|:||:|||.|
  Fly   365 EKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGR 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 57/200 (29%)
SF2_C_DEAD 408..537 CDD:350174 32/134 (24%)
DUF4217 570..627 CDD:464056
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 57/204 (28%)
SF2_C_DEAD 288..414 CDD:350174 32/134 (24%)
Blue background indicates that the domain is not in the aligned region.

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