DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pit and Dbp21E2

DIOPT Version :9

Sequence 1:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster


Alignment Length:524 Identity:128/524 - (24%)
Similarity:217/524 - (41%) Gaps:114/524 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 AKKTKLLPNKSKAQNGKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGA--------------V 194
            |.|||  |.|:|:: ||..|.:...:...|...|...:..|..|.||..|              :
  Fly    26 AVKTK--PPKAKSK-GKKQKGEPLISCRRSQFDLTQYEQTDAKFGSLSLASKGWLHNKSKGDFFI 87

  Fly   195 SEATLRAIK-----------------------------EMGFTEMTEIQSKSLTPLLKGRD--LV 228
            ..|::|..:                             |:|...:|.||.:.: |::.|.:  |:
  Fly    88 LNASVRGEELQQEMQTVDEFLESTGMQIHPQLLENLRVELGIKLLTGIQKQGM-PVVHGNEHCLI 151

  Fly   229 GAAQTGSGKTLAFLIPAVE-LINKLRFMPR--NGTGVIIISPTRELSMQTFGVLKELMAHHHHTY 290
             ||:||.|||:.:|:|.|: |:.|.....|  |...|:|::|.|||:.|..||.::|....:...
  Fly   152 -AAETGCGKTITYLLPIVDKLLQKEVVTERKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKV 215

  Fly   291 GLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEEL 355
            ..::||:.:|:......:.::|||||.| .|..|..:..:..:.::.|::||.|.:|:..|.::|
  Fly   216 QSLLGGNTKQLMMNPQFEEVDILVATLG-ALSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKL 279

  Fly   356 KQIINLLP--------KRRQTMLFSATQ-TARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQG 411
            ...:...|        ...|.:|.|||. |...|.|.|:                 ..||.:.: 
  Fly   280 SYFLRRFPFHLVQKEDAGTQMILASATMPTNTREILHKV-----------------IDVDTIRE- 326

  Fly   412 YIVCPSEKRLL--VLFTFLKKNR----------------KKKVMVFFSSCMSVKYHHELF-NYID 457
             :|.|...||:  |...||:.::                |::.::.||:..:......:| |...
  Fly   327 -VVSPHLHRLMSHVTQKFLRLSKADRPATLLSLVKHDLAKRRPLIVFSNKSTTSDFVSIFLNNSG 390

  Fly   458 LPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVG 522
            :...:::|......|...|.||.|....:|..|||.:||||..:...:|.:|.|....:||||.|
  Fly   391 VNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCG 455

  Fly   523 RTARGSGTSGHAL---LLMRPEELGFLRYLK-AAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFL 583
            |..| .|....||   |:....|:..::.:: ||:        :...:.|:...:..:|.|....
  Fly   456 RIGR-VGNMDKALVTNLISSRREIDVVQRIEHAAR--------TGGLLPDVNANIRNIINKRIVA 511

  Fly   584 NQSA 587
            ...|
  Fly   512 EMKA 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_001287459.1 SrmB 186..677 CDD:223587 115/482 (24%)
DEADc 187..394 CDD:238167 66/263 (25%)
HELICc 408..537 CDD:238034 39/150 (26%)
DUF4217 569..627 CDD:290667 3/19 (16%)
Dbp21E2NP_608544.1 P-loop_NTPase 113..314 CDD:304359 57/203 (28%)
DEXDc 126..330 CDD:214692 63/225 (28%)
HELICc 343..462 CDD:238034 31/119 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451665
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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