DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pit and CG32344

DIOPT Version :9

Sequence 1:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster


Alignment Length:595 Identity:156/595 - (26%)
Similarity:268/595 - (45%) Gaps:108/595 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 GKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLK 223
            |.|:.|::..|.:.....|..:...::|.......:....::.|.:.|:...|.||.|::..:|:
  Fly    11 GFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILE 75

  Fly   224 GRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHH 288
            |||:|..|:||||||..||||..|.:.  |..|..|...:|:||||||::||:..:|||......
  Fly    76 GRDVVAMAKTGSGKTACFLIPLFEKLQ--RREPTKGARALILSPTRELAVQTYKFIKELGRFMEL 138

  Fly   289 TYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEE 353
            ...||:||.:...:...:....:::||||||.| ||....|....:::.::.||.||:.|:||.|
  Fly   139 KSILVLGGDSMDSQFSAIHTCPDVIVATPGRFL-HLCVEMDLKLNSIEYVVFDEADRLFEMGFGE 202

  Fly   354 ELKQIINLLPKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSE 418
            :|.:.::.||..|||::||||....:...::..| ::|:.:.:  :.::...|.|...::.|..:
  Fly   203 QLNETLHRLPSSRQTVMFSATLPKLLVEFARAGL-NDPVLIRL--DVESKLPDALALKFLYCRPD 264

  Fly   419 KRLLVLFTFLKK--NRKKKVMVFFSSCMSVKYHHELFNYI----DLPVTSIHGKQKQTKRTTTFF 477
            .|...|...||.  ..:.:.:||    ...::|.||.:||    .:...|::.......|.....
  Fly   265 DRYTALVVLLKYVIPVQSQTVVF----AGTQHHVELISYILTEAGISNASVYSSLDPAARKINTA 325

  Fly   478 QFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEE 542
            :|.|.:..:|:.|||||||:|||.:|::|....|..|:.::|||||.|| :|.:|.|..::..::
  Fly   326 KFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCAR-AGRTGTAYSIVSTDD 389

  Fly   543 LGFLRYL--------------KAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLN---QSAKEA 590
            ...|..|              ....:|.:..|.....:.||:        |::.:.   ::::.|
  Fly   390 TAHLLDLHLFLNRPFNIHDSSALGTIPQDLLEEEHLTVTDIK--------KSHHIAGVLRTSENA 446

  Fly   591 FKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFL-VPPVVDL----------------------K 632
            :|.|:.:..         |.:.|..|..|...|. :.|:.|.                      |
  Fly   447 YKKYLSSRP---------VASTDANARVKKIKFFALKPLEDFFTAAPVLAQAAEASGQSTESQAK 502

  Fly   633 VGAAKRERPEK-----------RVGGGGFGFYKKMNEGSASKQ---------RHFKQVNR----- 672
            |.||:|:..|:           |.||..|    ::|....|.|         :|.:.:|:     
  Fly   503 VSAAERKLQEEKHDILVKMRSFRPGGTVF----ELNTTQKSTQFIVMKEKRMQHAEVINKFRQQR 563

  Fly   673 -----DQAKK 677
                 |:.||
  Fly   564 AEEDIDEEKK 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_001287459.1 SrmB 186..677 CDD:223587 149/566 (26%)
DEADc 187..394 CDD:238167 72/206 (35%)
HELICc 408..537 CDD:238034 42/134 (31%)
DUF4217 569..627 CDD:290667 10/61 (16%)
CG32344NP_612028.4 DEADc 41..243 CDD:238167 72/205 (35%)
DEXDc 54..243 CDD:214692 72/192 (38%)
HELICc 263..384 CDD:238034 40/125 (32%)
DBP10CT 666..721 CDD:285373
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451648
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.