DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pit and CG6227

DIOPT Version :9

Sequence 1:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster


Alignment Length:722 Identity:185/722 - (25%)
Similarity:306/722 - (42%) Gaps:168/722 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VKREKMKKELSQ------KKGNKNAQKQEPPKQNGNKPSKKPEKLSKKHVAKDEDDDLEEDFQEA 71
            |||....|...:      .|...:.:|:.||.....:..||||.::.|.      :.:||....|
  Fly   280 VKRPTFSKSFGKLGIGLATKAEADIKKEPPPVDTKKEIKKKPEPVAAKM------EIVEEPTVAA 338

  Fly    72 PLPKKKQQKQPPKKQQIQVANSDSESDDDEQEDEADE-DSDLDEV-------------------- 115
            ....||:.:||....:.:....|....:.|.|||.|. |:.:.||                    
  Fly   339 GEKTKKEPEQPHVGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGV 403

  Fly   116 ----------------AEVDEEDVDS--GSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPA 162
                            .||.|:::||  .|.:|:.::..|....:..|..|.|           |
  Fly   404 VILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKEL-----------A 457

  Fly   163 KDD----------EPFTVE----SSLAALD---YRDSDDRSFASLKG-------------AVSEA 197
            |.|          :.|.||    :.:.|.|   ||  .|.....:||             .||:.
  Fly   458 KIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYR--SDLEGIQVKGKGCPKPIKTWAQCGVSKK 520

  Fly   198 TLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAV-ELINKLRFMPRNGTG 261
            .:..::.:||.:.|.||.:::..::.||||:|.|:|||||||||::|.. .::::......:|..
  Fly   521 EMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAI 585

  Fly   262 VIIISPTRELSMQTFGVLKELMAHHHHTYGL----VMGGSNRQVESEKLGKGINILVATPGRLLD 322
            .||::|||||.||....:::.    ..:.||    |.||:....:..:|.:|..|:|.||||::|
  Fly   586 AIIMAPTRELCMQIGKDIRKF----SKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 646

  Fly   323 HLQNSPDFL--YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSATQTARIEALSKL 385
            .|..:...:  .:.:..:::||.||:.::|||.::.:||:.:...|||::||||...::|||::.
  Fly   647 MLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 711

  Fly   386 ALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLK-----------KNRKKKVMVF 439
            .|| :||.|.|...  :.....:||..::...:.:...|...|.           .::::...:.
  Fly   712 ILK-KPIEVIVGGR--SVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADIL 773

  Fly   440 FSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDW 504
            ....|...|          |..|:||...|..|.:|...|.:.:..:|:.|.|||||||:..:..
  Fly   774 LRDLMKASY----------PCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLIL 828

  Fly   505 IVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRY---------LKAAKVPLNEFE 560
            :|.||.|:...:|:||.|||.| :|..|.|...:.||:   .||         |....:|. |.:
  Fly   829 VVNYDVPNHYEDYVHRCGRTGR-AGKKGSAYTFITPEQ---SRYAGDIIRAMDLSGTLIPA-ELQ 888

  Fly   561 FSWQKIADIQLQLEKLI-------AKNYFLNQ----SAKEAFKSYVRAY---DS----------- 600
            ..|.:...:|....|.:       .|.:..::    :|||:.|....|.   ||           
  Fly   889 ALWTEYKALQEAEGKTVHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDID 953

  Fly   601 HQLKQIF 607
            .|::|||
  Fly   954 QQIEQIF 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_001287459.1 SrmB 186..677 CDD:223587 134/487 (28%)
DEADc 187..394 CDD:238167 73/226 (32%)
HELICc 408..537 CDD:238034 37/139 (27%)
DUF4217 569..627 CDD:290667 14/64 (22%)
CG6227NP_573020.2 SrmB 482..967 CDD:223587 139/503 (28%)
DEADc 516..719 CDD:238167 71/207 (34%)
HELICc 733..860 CDD:238034 36/137 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451476
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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