Protein Alignment pit and Ddx51

DIOPT Version :9

• Sequence 1: NP_001287459.1
• Gene: pit / 42595
• FlyBaseID: FBgn0266581
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: XP_006249623.2
• Gene: Ddx51 / 304570
• RGDID: 1309580
• Length: 635
• Species: Rattus norvegicus
• Alignment Length: 616
• Identity: 155/616 - (25%)
• Similarity: 262/616 - (42%)
• Gaps: 121/616 - (19%)

  Fly    15 REKMKKELSQKKGNKNAQKQEPPKQNGNKPSKKPEKLSKKHVAKDEDDDLEEDFQEAPLPKKKQQ 79
            |.::..|..|.:..:..|:|             ||..|....|            |||:   :::
  Rat    27 RARVLLERLQNRAREREQRQ-------------PELESTGTAA------------EAPV---RRR 63

  Fly    80 KQPPKKQQIQVANSDSESDDDEQEDEADEDSDLDEVAEVDEEDVDSGSEDDDQQEDEDEEEPVPA 144
            ::|.:::.:..:.::.......:..:.::|.|.....|..||..:|..:..:..:::.:..|.|.
  Rat    64 RRPRRRRGVSGSVAEKPEAPRAKRQKVEDDVDAGRGEETPEELSESAEDPGESPQEDVQRPPAPG 128

  Fly   145 K-----KTKLLPNKSKAQNGKPAKDDEPFTVESSLAALDYRDSDDRSFASLKGAVSEATLRAIKE 204
            :     ..|.:|   |.|...||...:|..|:.|:.. |....:|..      .|.....:.::.
  Rat   129 RVLGDFARKKVP---KVQPFLPAWLAKPSCVKKSVTE-DLTPIEDIP------EVHPDLQKQLRA 183

  Fly   205 MGFTEMTEIQSKSLTPLLKGRD---LVG-----------AAQTGSGKTLAFLIPAVE-LINKLRF 254
            .|.:....:|:..:..||:..|   |||           :|.|||||||||:||.|: |::::..
  Rat   184 NGISSYFPVQAAVIPALLESADNGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVC 248

  Fly   255 MPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESE----KLGKGI----N 311
            ..|    .:::.||:||:.|...|.............||.|..:...|.|    |...|.    :
  Rat   249 HIR----ALVVLPTKELAQQVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQKTADGFCCLAD 309

  Fly   312 ILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQII-------------NLLP 363
            |:|||||||:||:..:|.|..:.|:.|||||.||:::...:..|.:::             .||.
  Rat   310 IVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFYTEDPTGSCALLQ 374

  Fly   364 KRR----------------QTMLFSATQTARIEALSKLALKSEPIY---VGVHDNQDTATVD--- 406
            :.:                |.:|||||.|...|.|.:|.|....::   :|....:||..||
  Rat   375 RTQPQAVTAASTCIPQMPLQKLLFSATLTQNPEKLQRLGLYQPRLFSTRLGHQSPRDTVEVDENL 439

  Fly   407 -------GLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELF----NYIDLPV 460
                   ||...|:.|....:.|::|..:......:.:.|.:   |.:..|.||    .:..:.|
  Rat   440 GKYTFPVGLTHHYVPCRLSSKPLIVFHLVLGMNFSRALCFTN---SRENSHRLFLLAQAFGGVSV 501

  Fly   461 TSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTA 525
            .....:....:|.....||...:..:|:.||..|||:|:..|:.::.||.|...|.|:|||||||
  Rat   502 AEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTA 566

  Fly   526 RGSGTSGHAL-LLMRPEELGFLRYLKAAKVP 555
            | :|.:|.|. ||::.:|..||:.:..|.||
  Rat   567 R-AGKTGQAFTLLLKVQERKFLQMVSEAGVP 596

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pit	NP_001287459.1	SrmB	186..677	CDD:223587	123/440 (28%)
		DEADc	187..394	CDD:238167	71/261 (27%)
		HELICc	408..537	CDD:238034	38/133 (29%)
		DUF4217	569..627	CDD:290667
Ddx51	XP_006249623.2	PRK01297	77..612	CDD:234938	142/538 (26%)
		DEADc_DDX51	177..421	CDD:350714	70/247 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D973872at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010