Protein Alignment pit and vas

DIOPT Version :9

• Sequence 1: NP_001287459.1
• Gene: pit / 42595
• FlyBaseID: FBgn0266581
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: NP_001260458.1
• Gene: vas / 26067080
• FlyBaseID: FBgn0283442
• Length: 661
• Species: Drosophila melanogaster
• Alignment Length: 499
• Identity: 137/499 - (27%)
• Similarity: 233/499 - (46%)
• Gaps: 92/499 - (18%)

  Fly    98 DDDEQEDEADEDS---------DLDEVAEVDEEDVDSG-----SEDDDQQEDEDEEEPVPAKKTK 148
            |.||:....|.:.         |.:|......|..|.|     ..:||...:.:..|.|..|:..
  Fly   137 DGDERRGRLDREERGGERRGRLDREERGGERGERGDGGFARRRRNEDDINNNNNIVEDVERKREF 201

  Fly   149 LLPNK-------------------SKAQNGKPAK---DDEPFTVESSLAALDYRDSDDRSFASLK 191
            .:|.:                   || .|..|.|   .|.|..::...:| |.||
  Fly   202 YIPPEPSNDAIEIFSSGIASGIHFSK-YNNIPVKVTGSDVPQPIQHFTSA-DLRD---------- 254

  Fly   192 GAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMP 256
                 ..:..:.:.|:...|.||..|:..:..||||:..||||||||.|||:|   :::||...|
  Fly   255 -----IIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLP---ILSKLLEDP 311

  Fly   257 R----NGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATP 317
            .    ....|:|:||||||::|.|...::.....:...|:|.||::.:.::|.:.:|.::::|||
  Fly   312 HELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATP 376

  Fly   318 GRLLDHLQNSPDFL-YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKR--RQTMLFSATQTARI 379
            |||||.:..:  |: :::.:.:::||.||:|::||.|::::|:..:..|  .||::||||....|
  Fly   377 GRLLDFVDRT--FITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEI 439

  Fly   380 EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKV-------- 436
            :.::...||:. ::|.:          |:..|  .|...|:  .::...|..::.|:
  Fly   440 QRMAGEFLKNY-VFVAI----------GIVGG--ACSDVKQ--TIYEVNKYAKRSKLIEILSEQA 489

  Fly   437 ---MVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLD 498
               :||..:.....:.....:..:.|.|||||.:.|::|......|.|....:|:.|.||:||||
  Fly   490 DGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLD 554

  Fly   499 IPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEE 542
            |..:..::.||.|....:|:||:|||.| .|.:|.|.....||:
  Fly   555 IKNIKHVINYDMPSKIDDYVHRIGRTGR-VGNNGRATSFFDPEK 597

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pit	NP_001287459.1	SrmB	186..677	CDD:223587	111/375 (30%)
		DEADc	187..394	CDD:238167	68/213 (32%)
		HELICc	408..537	CDD:238034	39/139 (28%)
		DUF4217	569..627	CDD:290667
vas	NP_001260458.1	DEADc	247..454	CDD:238167	72/228 (32%)
		DEXDc	260..467	CDD:214692	72/224 (32%)
		Helicase_C	475..584	CDD:278689	32/109 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451611
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840