DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pit and Rs1

DIOPT Version :10

Sequence 1:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_061517461.1 Gene:Rs1 / 1270844 VectorBaseID:AGAMI1_014052 Length:897 Species:Anopheles gambiae


Alignment Length:771 Identity:210/771 - (27%)
Similarity:354/771 - (45%) Gaps:133/771 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MKKELSQKKGNKN---------AQKQEPPKQNGNKPSKKPEKLSKK-HVAKDEDDDLE-EDFQEA 71
            |||:..||...||         |........||.....:.|||:.: ...|..:||.| ||..|.
Mosquito     1 MKKDKKQKVAEKNKANGATAAAAGAATDDAVNGENGVVESEKLTHQLDFMKTLEDDAEVEDLSEE 65

  Fly    72 PLPKKKQQKQPPKKQQI-------QVANSDSESDDDEQED------EADEDSDLDEVAEV----D 119
            ...:.:.|....|.|::       |..:|..|.:.|..:|      ..:.....|::|.|    .
Mosquito    66 SETEIEYQPTKQKNQKLTDFDGGFQFVSSVKEYNHDTWDDLMKFVKRKNRGEVNDKIANVIRDRT 130

  Fly   120 EEDVDSGSEDDDQQEDED-----EEE-------------PVPAKKTKLLPNKSKAQNGKPA---- 162
            :|:.|: .:|||::|||:     .||             .|..:|.|.|   ::|:||.|.    
Mosquito   131 KENADA-LKDDDEEEDEEGNRAYNEEVDLSDDELKHDYMRVKERKGKKL---TEAENGGPTVEVK 191

  Fly   163 KDDEPFTVESSLAALDYR-DSDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRD 226
            :|.|..|.|.....::.. :.:.:||..:.  :|...::||..:|:...|.||:.::...|.|||
Mosquito   192 EDTEDGTKEDYFEEIEENANGEIQSFYQMD--LSRPLMKAIGALGYIYPTPIQASTIPIALMGRD 254

  Fly   227 LVGAAQTGSGKTLAFLIPAVELINKLRFMPRNG---TGVIIISPTRELSMQTFGVLKELMAHHHH 288
            :.|.|.||:|||.|:::|.:|   :|.:.|...   |.|:::.|||||..|.:.|.|:|....:.
Mosquito   255 ICGCAATGTGKTAAYMLPTIE---RLLYKPNVAQAVTRVLVLVPTRELGAQVYQVAKQLTQFTNV 316

  Fly   289 TYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEE 353
            ..|:.:||.:.:.:...|.|..::::||||||:||::|:|.|...:::.||:||.||:|:..|.|
Mosquito   317 DVGIAIGGLDVKAQEAVLRKNPDVVIATPGRLIDHIKNTPSFSLDSIEILILDEADRMLDEYFAE 381

  Fly   354 ELKQIINLLPKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSE 418
            ::|:||......|||||||||.|..::.|:.::|| :|:.:.|::||..|.  .|.|.:|.....
Mosquito   382 QMKEIIRSCSATRQTMLFSATMTEEVKDLAAVSLK-KPVKIFVNNNQTVAF--NLRQEFIRIREG 443

  Fly   419 K---RLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFC 480
            :   |..:|...:.:......|||..:..:......|...:.:....:||...|.:|..:..:|.
Mosquito   444 READREAILAALVCRTFHDHCMVFVQTKRTAHRLRILLGLLGVKTGELHGDLTQAQRLESLKEFK 508

  Fly   481 NAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGF 545
            :.:..||:.||||||||||..|..::.:..|.....|||||||||| :|.:|.::.|...:|...
Mosquito   509 DEQVDILIATDVAARGLDISTVKTVINFVMPATLEHYIHRVGRTAR-AGKAGVSVSLAGEQERKI 572

  Fly   546 LRYL--------KAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQ 602
            ::.:        |...:||:..|....|:|.::.::::::|:     :.|::..:...:...|.:
Mosquito   573 VKEIVKNAVSSVKNRIIPLDIIEKYRNKVAALEPEIDRVLAE-----ERAEKLLRQTEQQLTSAE 632

  Fly   603 LKQIFNVNTLDLQAVAKSFGFLVPP---------------------VVDLKVGAAKRER------ 640
            .|.:.|......|.:.       ||                     ..:.|..|.||:|      
Mosquito   633 RKLLGNAGKAAKQDIP-------PPREWFQTQHERREEKNRLAGEEQGEKKKAAKKRKRRDDDDE 690

  Fly   641 ---------PEKR------VGGGGFGFYKK-MNEGSASKQRHFKQVNRDQAKKFMR 680
                     .|||      .|||.....|| ..:.:|...:..||:.|::|.:.:|
Mosquito   691 EDFDPVRYHEEKRKQQKAAAGGGAVNSKKKSKTDANADANKTAKQLARERALEEVR 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 75/199 (38%)
SF2_C_DEAD 408..537 CDD:350174 40/131 (31%)
DUF4217 570..627 CDD:464056 6/56 (11%)
Rs1XP_061517461.1 None

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