Protein Alignment pit and ddx56

DIOPT Version :9

• Sequence 1: NP_001287459.1
• Gene: pit / 42595
• FlyBaseID: FBgn0266581
• Length: 680
• Species: Drosophila melanogaster
• Sequence 2: NP_001120553.1
• Gene: ddx56 / 100145707
• XenbaseID: XB-GENE-941616
• Length: 552
• Species: Xenopus tropicalis
• Alignment Length: 574
• Identity: 148/574 - (25%)
• Similarity: 253/574 - (44%)
• Gaps: 94/574 - (16%)

  Fly   174 LAALDYRD--SDDRSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSG 236
            :|||.:.:  .|||            .|::|.::|:.:.|.||.|::...|:|:||:..|:||||
 Frog     1 MAALQFHELGLDDR------------LLKSIADLGWAKPTLIQEKAIPLALEGKDLLARARTGSG 53

  Fly   237 KTLAFLIPAVE-LINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGL--VMGGSN 298
            ||.|:.||.:: |:.....:......|:|:.||:||..|...::::|..:......:  :.|.::
 Frog    54 KTAAYSIPIIQNLLQAKMTVSEQAIRVLILVPTKELGQQVQQMIRQLTVYCARDIKVADISGQAD 118

  Fly   299 RQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLP 363
            ...:...|.:..:|:|.||.|:|.|:......:...||.|:|||.|.:...||||:||.::..||
 Frog   119 ISAQRPILMEKPDIVVGTPSRVLTHMTQQTICVRDTLQALVIDEADLVFSFGFEEDLKNLLCQLP 183

  Fly   364 KRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQ--DTATVDGLEQGYIVCPSEKRLLVLFT 426
            |..|:.|.|||.:..::||.:|.|.: |:.:.:.::|  |::.   |.|.:|.|..|.:.|:|:|
 Frog   184 KIFQSFLMSATFSEDVQALKELVLHN-PVTLKLEESQFPDSSQ---LTQFHIQCEEEDKFLLLYT 244

  Fly   427 FLKKNRKKKVMVFFSSCMSVKYHHELF-NYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCT 490
            .||.:..:...:.|.:.:...|..:|| ....:|...::.:.....|.....||.......::.|
 Frog   245 LLKLSLIRGKTIIFVNEVDRSYRLKLFLEQFSIPACVLNSELPIHSRCHIISQFNQGFYDYIIAT 309

  Fly   491 DV-------------------------------AARGLDIPQVDWIVQYDPPDDPREYIHRVGRT 524
            |.                               .:||:|...|..::.:|.|.....||||.|||
 Frog   310 DEHSLADPSVKGRRGEGKKKGGKGQKGQDKEYGVSRGIDFQNVSTVLNFDFPQSVDSYIHRAGRT 374

  Fly   525 ARGSGTSGHALLLMRPEELGFLRYLKAA---KVP----LNEFEFSWQKIADIQLQLEKLIAKNYF 582
            || :...|.||..:...||..|..::.|   .||    |..:.|..:::...:.:...  |....
 Frog   375 AR-ANNPGVALTFVAHTELPLLSEVEEALGGGVPDEHVLKPYRFCMEEVEGFRYRCRD--AMRSV 436

  Fly   583 LNQSAKEAFKSYVR--AYDSHQLKQIFNVNTLDLQ----------AVAKSF-----GFLVPPVVD 630
            ..|:.|||....::  ..:|.:||..|..|..|.|          |:.|..     .:|:||.:.
 Frog   437 TKQAIKEARLKEIKEELLNSEKLKTYFEDNPRDFQLLRHDKPLHPAIVKPHLKNVPEYLIPPALR 501

  Fly   631 LKVGAAKRERPEKRVGGGGFGFYKKMNEGSASK-------QRHFKQVNRDQAKK 677
            .......|:|..:::..|..||     :|:.||       .|.||.....:.:|
 Frog   502 AVADIHNRKRKRRKLKAGNLGF-----QGTRSKFQRGQNPLRSFKYAKSKRRRK 550

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pit	NP_001287459.1	SrmB	186..677	CDD:223587	141/558 (25%)
		DEADc	187..394	CDD:238167	65/209 (31%)
		HELICc	408..537	CDD:238034	38/160 (24%)
		DUF4217	569..627	CDD:290667	15/74 (20%)
ddx56	NP_001120553.1	PRK11192	5..469	CDD:236877	126/482 (26%)
		P-loop_NTPase	6..214	CDD:304359	68/220 (31%)
		Helicase_C	251..378	CDD:278689	25/127 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D973872at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920