DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6015 and Cdc40

DIOPT Version :10

Sequence 1:NP_651005.1 Gene:CG6015 / 42593 FlyBaseID:FBgn0038927 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_082155.1 Gene:Cdc40 / 71713 MGIID:1918963 Length:579 Species:Mus musculus


Alignment Length:577 Identity:356/577 - (61%)
Similarity:447/577 - (77%) Gaps:14/577 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SYASSSDEESDHADAATATTNSEPS-APIP--DHLLPVDKTHS--LSKSIAVCAAPTVVPLGASA 65
            ||.|.|..|||        ::||.| .|:|  |.|:.:.|:.|  ||.::||.:||.|.......
Mouse    11 SYGSGSGSESD--------SDSEGSRCPLPAADSLMHLTKSPSAKLSLTVAVDSAPEVAVKEDLE 67

  Fly    66 VPRTLDPTLKEVTYNPRYEEMYAPVKGPEHPDLTMQQRAPRNTLAGYVEKAHINAFEFENQRRTF 130
            ....|||.:|||.|||.||.|:||..|||:|..|.|..||||.|:||.|.||||.|.||.|||||
Mouse    68 TGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTF 132

  Fly   131 HTYGYALDPSVDDQADGQSFVGDLQSAYDDNGKTVFEPPKAK-KLRKQEKNDNPEDIEGFLGPWG 194
            .|||||||||:|:......::|.::.|..:.|.||||..:.| :.||:.|.::..:|:||||||.
Mouse   133 ATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGPWA 197

  Fly   195 KFENEVSVAKPNEQERAELDELLSKRHKRGRIPEDKPLEEKSTLHIKDAYDYQGRSYLHAPHDLG 259
            |:.:|..||||:|:|:.||||:.:||.|:|:..|:||.|||:.||:|:.||||||||||.|.|:|
Mouse   198 KYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTILHVKEMYDYQGRSYLHIPQDVG 262

  Fly   260 VNLRSNAPPTKCFLPKAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRT 324
            |||||:.||.||:|||..||.||||.||:|::|.||.:.|||||.||||::|||||||:|||:||
Mouse   263 VNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRT 327

  Fly   325 FSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFV 389
            |.||.:|::||.:|..||.||||:||||:||||.|||..:||||.||:|:||||:||..||:|||
Mouse   328 FIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFV 392

  Fly   390 AGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMKYIA 454
            ||.|||||:.||.|||:||||||||||:|:||.|||:|||||:||||||:|:||||||||.||||
Mouse   393 AGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457

  Fly   455 DPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDMSY 519
            :|:|||||||||:|||||:||||:||:|:||.|.|||::|:||.|.||||:|||||:||||||||
Mouse   458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSY 522

  Fly   520 LVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWDGQIKYWD 576
            ::||||:||..||||||||:|.:::|||.|||.|:|||||.|||:|.||||.||.||
Mouse   523 VISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6015NP_651005.1 WD40 277..576 CDD:238121 213/298 (71%)
WD40 repeat 289..327 CDD:293791 26/37 (70%)
WD40 repeat 332..368 CDD:293791 22/35 (63%)
WD40 repeat 374..412 CDD:293791 27/37 (73%)
WD40 repeat 418..453 CDD:293791 27/34 (79%)
WD40 repeat 461..500 CDD:293791 27/38 (71%)
WD40 repeat 509..532 CDD:293791 16/22 (73%)
Cdc40NP_082155.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 12/30 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..237 17/32 (53%)
WD40 281..579 CDD:238121 213/297 (72%)
WD 1 286..326 27/39 (69%)
WD40 repeat 292..330 CDD:293791 26/37 (70%)
WD 2 330..369 23/38 (61%)
WD40 repeat 335..371 CDD:293791 22/35 (63%)
WD 3 371..413 29/41 (71%)
WD40 repeat 377..415 CDD:293791 27/37 (73%)
WD 4 416..455 30/38 (79%)
WD40 repeat 421..503 CDD:293791 61/81 (75%)
WD 5 459..498 28/38 (74%)
WD 6 504..545 32/40 (80%)
WD40 repeat 511..547 CDD:293791 26/35 (74%)
WD 7 548..578 22/29 (76%)
WD40 repeat 553..578 CDD:293791 18/24 (75%)

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