DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6015 and CDC40

DIOPT Version :9

Sequence 1:NP_651005.1 Gene:CG6015 / 42593 FlyBaseID:FBgn0038927 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_056975.1 Gene:CDC40 / 51362 HGNCID:17350 Length:579 Species:Homo sapiens


Alignment Length:577 Identity:356/577 - (61%)
Similarity:444/577 - (76%) Gaps:14/577 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SYASSSDEESDHADAATATTNSEPS-APIP--DHLLPVDKTHSLSKSIAVC--AAPTVVPLGASA 65
            ||.|.|..|||        ::||.| .|:|  |.|:.:.|:.|...|:||.  :||.|.......
Human    11 SYGSGSGSESD--------SDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEVAVKEDLE 67

  Fly    66 VPRTLDPTLKEVTYNPRYEEMYAPVKGPEHPDLTMQQRAPRNTLAGYVEKAHINAFEFENQRRTF 130
            ....|||.:|||.|||.||.|:||..|||:|..|.|..||||.|:||.|.||||.|.||.|||||
Human    68 TGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTF 132

  Fly   131 HTYGYALDPSVDDQADGQSFVGDLQSAYDDNGKTVFEPPKAK-KLRKQEKNDNPEDIEGFLGPWG 194
            .|||||||||:|:......::|.::.|..:.|.||||..:.| :.||:.|.::..:|:||||||.
Human   133 ATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGPWA 197

  Fly   195 KFENEVSVAKPNEQERAELDELLSKRHKRGRIPEDKPLEEKSTLHIKDAYDYQGRSYLHAPHDLG 259
            |:.:|..||||:|:|:.||||:.:||.|:|:..|:||.|||:.||:|:.||||||||||.|.|:|
Human   198 KYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTILHVKEMYDYQGRSYLHIPQDVG 262

  Fly   260 VNLRSNAPPTKCFLPKAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRT 324
            |||||..||.||:|||..||.||||.||:|::|.||.:.|||||.||||::|||||||||||:||
Human   263 VNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRT 327

  Fly   325 FSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFV 389
            |.||.:|::||.:|..||.||||:||||:||||.|||..:||||.||:|:||||:||..||:|||
Human   328 FIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFV 392

  Fly   390 AGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMKYIA 454
            ||.|||||:.||.|||:||||||||||:|:||.|||:|||||:||||||:|:||||||||.||||
Human   393 AGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIA 457

  Fly   455 DPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDMSY 519
            :|:|||||||||:|||||:||||:||:|:||.|.|||::|:||.|.||||:|||||:||||||||
Human   458 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSY 522

  Fly   520 LVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWDGQIKYWD 576
            ::||||:||..||||||||:|.:::|||.|||.|:|||||.|||:|.||||.||.||
Human   523 VISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6015NP_651005.1 WD40 <274..576 CDD:225201 216/301 (72%)
WD40 277..576 CDD:238121 214/298 (72%)
WD40 repeat 289..327 CDD:293791 27/37 (73%)
WD40 repeat 332..368 CDD:293791 22/35 (63%)
WD40 repeat 374..412 CDD:293791 27/37 (73%)
WD40 repeat 418..453 CDD:293791 27/34 (79%)
WD40 repeat 461..500 CDD:293791 27/38 (71%)
WD40 repeat 509..532 CDD:293791 16/22 (73%)
CDC40NP_056975.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 16/43 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..237 17/32 (53%)
WD40 281..579 CDD:238121 214/297 (72%)
WD 1 286..326 28/39 (72%)
WD40 repeat 292..330 CDD:293791 27/37 (73%)
WD 2 330..369 23/38 (61%)
WD40 repeat 335..371 CDD:293791 22/35 (63%)
WD 3 371..413 29/41 (71%)
WD40 repeat 377..415 CDD:293791 27/37 (73%)
WD 4 416..455 30/38 (79%)
WD40 repeat 421..503 CDD:293791 61/81 (75%)
WD 5 459..498 28/38 (74%)
WD 6 504..545 32/40 (80%)
WD40 repeat 511..547 CDD:293791 26/35 (74%)
WD 7 548..578 22/29 (76%)
WD40 repeat 553..578 CDD:293791 18/24 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160031
Domainoid 1 1.000 262 1.000 Domainoid score I1959
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5716
Inparanoid 1 1.050 758 1.000 Inparanoid score I554
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55903
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004340
OrthoInspector 1 1.000 - - oto89346
orthoMCL 1 0.900 - - OOG6_102256
Panther 1 1.100 - - LDO PTHR43979
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R987
SonicParanoid 1 1.000 - - X3608
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1312.930

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