DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6015 and Y54G2A.12

DIOPT Version :9

Sequence 1:NP_651005.1 Gene:CG6015 / 42593 FlyBaseID:FBgn0038927 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_500252.2 Gene:Y54G2A.12 / 190278 WormBaseID:WBGene00021877 Length:274 Species:Caenorhabditis elegans


Alignment Length:370 Identity:97/370 - (26%)
Similarity:154/370 - (41%) Gaps:130/370 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLGLQSYASSSDEESDHADAATATTNSEPSAPIPDHLLPVDKTHSLSKSIAVCAAPTVVPLGASA 65
            |..||:|:.|  |.||:..:.......:.||.:               ..|:..||.|....|..
 Worm     1 MDALQAYSDS--EHSDNDVSMDQIAKGKSSALL---------------ERAIVTAPDVESKSAIR 48

  Fly    66 VPRTLDPTLKEVTYNPRYEEMYAPVKGPEHPDLTMQQRAPRNTLAGYVEKAHINAFEFENQRRTF 130
            ....:||..||:..||::::::.|..||                        :|.|:.|      
 Worm    49 QVAIVDPKTKEIKSNPKFDQLFKPESGP------------------------VNHFKSE------ 83

  Fly   131 HTYGYALDPSVDDQADGQSFVGDLQSAYDDNGKTVFEPPK-AKKLRKQEKNDNPEDIEGFLGPWG 194
                         |.....||||::.|..:.|.::||..| ..:.||:..||:..||:|:.|||.
 Worm    84 -------------QFGTTRFVGDVKKAEAEKGVSLFESKKTGGEQRKRVGNDDSADIDGYSGPWS 135

  Fly   195 KFENEVSVAKPNEQERAELDELLSK-RHKRGRIPEDKP-----LEEKSTLHIKDAYDYQGRSYLH 253
            ::.:|.:||||..:.:.::||::.| :.|..|:.::|.     .||.||||:|:..||       
 Worm   136 RYVDEKTVAKPTPELQKQMDEIVKKGQEKSRRLKKEKEDSEHMAEESSTLHLKETVDY------- 193

  Fly   254 APHDLGVNLRSNAPPTKCFLPKAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGE 318
                                                               |||.::||||||..
 Worm   194 ---------------------------------------------------SMDTKIKLWEVYDR 207

  Fly   319 RRCIRTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDV 363
            :|.:||:|||:..::::|:||.||.|||||:|||:     .||.:
 Worm   208 QRVVRTYSGHKLPVREVAFNNEGTEFLSASFDRYV-----NTGQI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6015NP_651005.1 WD40 <274..576 CDD:225201 30/90 (33%)
WD40 277..576 CDD:238121 30/87 (34%)
WD40 repeat 289..327 CDD:293791 12/37 (32%)
WD40 repeat 332..368 CDD:293791 15/32 (47%)
WD40 repeat 374..412 CDD:293791
WD40 repeat 418..453 CDD:293791
WD40 repeat 461..500 CDD:293791
WD40 repeat 509..532 CDD:293791
Y54G2A.12NP_500252.2 WD40 <194..>240 CDD:392136 25/45 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167548
Domainoid 1 1.000 181 1.000 Domainoid score I2066
eggNOG 1 0.900 - - E1_KOG0282
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004340
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

Return to query results.
Submit another query.