DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6015 and wdr25

DIOPT Version :9

Sequence 1:NP_651005.1 Gene:CG6015 / 42593 FlyBaseID:FBgn0038927 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_002936634.1 Gene:wdr25 / 100127875 XenbaseID:XB-GENE-5882190 Length:483 Species:Xenopus tropicalis


Alignment Length:588 Identity:139/588 - (23%)
Similarity:238/588 - (40%) Gaps:122/588 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQSYASSSDEESDHADAATATTNSEPSAPIPDHLLPVDKTHSLSKSIAVCAAPTVVPLGASAVPR 68
            :.|..|..|.:||     |..|         :||....|.||: ||.|:..:..|.         
 Frog     1 MNSLVSYDDSDSD-----TERT---------EHLKAFPKEHSV-KSFAMSFSSRVY--------- 41

  Fly    69 TLDPTLKEVTYNPRYEEMYAPVKGPEHPDLTMQQRAPRNTLAGYVE-KAHINAFEFENQRRTFHT 132
                                     |:.||:..:.:  |..:|... ...||..:..|..:|:.:
 Frog    42 -------------------------ENDDLSKDRTS--NMCSGLSSTNKDINKADCHNHAKTYFS 79

  Fly   133 YGYALDPSVDDQADGQSFVGDLQSAYDD--NGKTVFEPPKAKKLRKQEKNDNPEDIEGFLGPWGK 195
            ..|: .|||:......|.:.|.:....|  :..|..:|...|:||:::.::|.            
 Frog    80 GAYS-TPSVNATTSFASALRDTKRPASDAADSNTTVKPYIPKRLRQEQLHNND------------ 131

  Fly   196 FENEVSVAKPNEQERAELDELLSKRHKRGRIPEDKPLEEKSTLHIKDAY---DYQGRSYLHAPHD 257
                 ||.|.:.....:..:                     ::.:::.|   ||. :.:|.:.: 
 Frog   132 -----SVGKVDTVSHTQFSK---------------------SIALENVYRVSDYL-KPFLLSKY- 168

  Fly   258 LGVNLRSNAPPTKCFLPKAHIHTWSGHNKGISSIRWFP--KTAHLLLSGSMDCRVKLWEVYGERR 320
                       |...:|:..:...:.|...::.::|.|  :.:|||||.|||..:|:|......:
 Frog   169 -----------TSTEIPRNLVFQMNEHTGPVNRVQWCPVRQHSHLLLSASMDTTIKIWNGVDSGK 222

  Fly   321 CIRTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQ 385
            |:.|||.|..|::|..|:..|...||..:|..:.|.|.|||..:...........|:|||::  .
 Frog   223 CLNTFSHHSGAVRDSQWSACGQKILSGGFDSMLYLTDVETGKALFNARNEFKIGVVRFHPND--H 285

  Fly   386 HLFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKS-----MRIWEWD 445
            :|.|.|.....:..||.|:..::..|...:.....:.|:...:.|::|:|..|     ..|..||
 Frog   286 NLCVCGGFSPALRAWDMRTDKVIHIYKAGVQQHFEVLFLPGGKEFLSTTDSVSRDSADRTIIAWD 350

  Fly   446 IPVDMKYIADPTMH---SMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGY 507
            .....| |::...|   :.|::.|.|.......|:..|.:.:||....:||::||.|.||.|.|:
 Frog   351 FQTAAK-ISNQIFHERYTCPSLALHPKESIFVAQTNGNYMALFSTQRPYKMDKKKRFEGHKVEGF 414

  Fly   508 ACQLDFSPDMSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWDGQI 572
            |...:||||.|.||:|..:|....:.:.|.::.:........|||..:||..:|.:.|:.|||||
 Frog   415 AVGCEFSPDGSLLVTGSSEGTVSFYSYHTARIVRSISGDGSACISVNFHPVLSSLLATSYWDGQI 479

  Fly   573 KYW 575
            :.|
 Frog   480 RIW 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6015NP_651005.1 WD40 <274..576 CDD:225201 93/312 (30%)
WD40 277..576 CDD:238121 92/309 (30%)
WD40 repeat 289..327 CDD:293791 15/39 (38%)
WD40 repeat 332..368 CDD:293791 11/35 (31%)
WD40 repeat 374..412 CDD:293791 10/37 (27%)
WD40 repeat 418..453 CDD:293791 9/39 (23%)
WD40 repeat 461..500 CDD:293791 11/38 (29%)
WD40 repeat 509..532 CDD:293791 9/22 (41%)
wdr25XP_002936634.1 WD40 177..483 CDD:238121 92/309 (30%)
WD40 repeat 191..229 CDD:293791 15/37 (41%)
WD40 repeat 235..274 CDD:293791 11/38 (29%)
WD40 repeat 275..312 CDD:293791 10/38 (26%)
WD40 repeat 322..361 CDD:293791 10/39 (26%)
WD40 repeat 368..407 CDD:293791 11/38 (29%)
WD40 repeat 415..450 CDD:293791 11/34 (32%)
WD40 repeat 457..482 CDD:293791 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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