DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-42 and Ndufa10

DIOPT Version :9

Sequence 1:NP_001262821.1 Gene:ND-42 / 42591 FlyBaseID:FBgn0019957 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_077159.1 Gene:Ndufa10 / 67273 MGIID:1914523 Length:355 Species:Mus musculus


Alignment Length:359 Identity:137/359 - (38%)
Similarity:209/359 - (58%) Gaps:31/359 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GGPRVPKAAPYPYKTKKYSVFNAIF-DKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEY 110
            |..||.:.....:...:|.:..||. |||:|:..|.|:||.|:|.|.:||:|.|||:|::|.|::
Mouse    21 GAQRVGRIHTSVHCKLRYGLLAAILGDKTTKKLHEYSRVITVDGNICSGKNKLAKEIAQQLGMKH 85

  Fly   111 YPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDVRNFCLDPSHDLAAQFQIR--MYMLRYSQYID 173
            ||...:.  |.::...|.|.||.:...||   .:..|..||..:....::::  :|..|..||.|
Mouse    86 YPEAGIQ--YSSTTTGDGRPLDIEFSGSC---SLEKFYDDPKSNDGNSYRLQSWLYASRLLQYAD 145

  Fly   174 ALQHVLSTGQGVVLERSPYSDFVFMEAMFRQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLP 238
            ||:|:||||||||||||.||||||:|||:.|||:.:.....|||:::.|:.|.|.||.|||:|:|
Mouse   146 ALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVP 210

  Fly   239 VDAVKKQIKARNVDYEVQSKVFSDAYLSDLEQLYKQQYLKDISTHAELLIYD-WTAGGETEVVVE 302
            |..|:.:|:.:...:|:  ||.| |||.|:|..||:.:|..:|...|:|:|| |.|...|: |||
Mouse   211 VPEVQSRIQKKGDPHEM--KVTS-AYLQDIENAYKKTFLPKMSEMCEVLVYDSWEAEDPTK-VVE 271

  Fly   303 DIERIDFNQ---FEADIHNKKMLDWRFPLEAEWCEARIKYCHEKPDLMNYFNVPRFDVPELVRSA 364
            |||.:.:|:   .:.|       ||.|    .:....::   :|.:::||..:|.: :||:...|
Mouse   272 DIEYLKYNKGPWLKQD-------DWTF----HYLRMLVQ---DKTEVLNYTTIPVY-LPEITIGA 321

  Fly   365 DDGKVWRDVWFNAPGMKYRPGYNADMGDEGLLTK 398
            ..|....:.:...||.||.|||||::||:.:..|
Mouse   322 HQGSRIYNSFRELPGRKYAPGYNAEVGDKWIWLK 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-42NP_001262821.1 NDUO42 84..308 CDD:238988 100/226 (44%)
Ndufa10NP_077159.1 NDUO42 59..277 CDD:238988 100/226 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843200
Domainoid 1 1.000 159 1.000 Domainoid score I4090
eggNOG 1 0.900 - - E1_COG1428
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15342
Inparanoid 1 1.050 214 1.000 Inparanoid score I3620
Isobase 1 0.950 - 0 Normalized mean entropy S5795
OMA 1 1.010 - - QHG45505
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006118
OrthoInspector 1 1.000 - - oto93552
orthoMCL 1 0.900 - - OOG6_107081
Panther 1 1.100 - - LDO PTHR10513
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3846
SonicParanoid 1 1.000 - - X4410
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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