DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-42 and ndufa10

DIOPT Version :10

Sequence 1:NP_524445.1 Gene:ND-42 / 42591 FlyBaseID:FBgn0019957 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001076817.1 Gene:ndufa10 / 496724 XenbaseID:XB-GENE-949136 Length:351 Species:Xenopus tropicalis


Alignment Length:335 Identity:122/335 - (36%)
Similarity:184/335 - (54%) Gaps:34/335 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLP 136
            ::|:|||..|||:|.|:|.:|:||.:.||:||:.|.|.|:|  :.|..|::....|...|..:..
 Frog    43 ERTTKRFGANSKIITVDGNLASGKGQLAKKLADRLGMRYFP--EADEHYLDKTTGDGSILPSKFS 105

  Fly   137 PSCRSYDVRNFCLDPSHDLAAQFQIR--MYMLRYSQYIDALQHVLSTGQGVVLERSPYSDFVFME 199
            .:| |.|  .|..||.......::::  ||.:|..||.|||:|:||||||.||||||:|||||:|
 Frog   106 GNC-SLD--KFYNDPKCPDGNSYRLQYWMYSVRLMQYSDALEHLLSTGQGAVLERSPFSDFVFLE 167

  Fly   200 AMFRQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSDAY 264
            ||::.||:.:.....|||::.|:|.|.|.||||||:|:|...|.|:|..:....|.::.:   .|
 Frog   168 AMYKNGYIRKQCIDHYNEIKGNSIDEFLPPHLVIYVDVPAAEVHKKILEKGHTSEKKAAL---PY 229

  Fly   265 LSDLEQLYKQQYLKDISTHAELLIYDWTAGGETEVVVEDIERIDFN------QFEADIHNKKMLD 323
            |..:|..||..:|..||..:|:|.|......:.|.||||||.:.|:      |.:...|:.:|  
 Frog   230 LQSIEDTYKDSFLPQISEKSEVLKYSGNEVQDVEKVVEDIEYMKFDKGPWTEQTDVTFHHLRM-- 292

  Fly   324 WRFPLEAEWCEARIKYCHEKPDLMNYFNVPRFDVPELVRSADDGKVWRDVWFNAPGMKYRPGYNA 388
                           :..:|..:.:...|||: :||:...|.:.......:.:.||.||..||||
 Frog   293 ---------------FVEDKDKVASLITVPRY-IPEITIGASEYDSAYYQYRSLPGRKYAKGYNA 341

  Fly   389 DMGDEGLLTK 398
            |:||:.:..|
 Frog   342 DIGDKMIWLK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-42NP_524445.1 NDUO42 84..308 CDD:238988 92/225 (41%)
ndufa10NP_001076817.1 NDUO42 55..273 CDD:238988 92/225 (41%)

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