DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-42 and ndufa10

DIOPT Version :9

Sequence 1:NP_001262821.1 Gene:ND-42 / 42591 FlyBaseID:FBgn0019957 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001076817.1 Gene:ndufa10 / 496724 XenbaseID:XB-GENE-949136 Length:351 Species:Xenopus tropicalis


Alignment Length:335 Identity:122/335 - (36%)
Similarity:184/335 - (54%) Gaps:34/335 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLP 136
            ::|:|||..|||:|.|:|.:|:||.:.||:||:.|.|.|:|  :.|..|::....|...|..:..
 Frog    43 ERTTKRFGANSKIITVDGNLASGKGQLAKKLADRLGMRYFP--EADEHYLDKTTGDGSILPSKFS 105

  Fly   137 PSCRSYDVRNFCLDPSHDLAAQFQIR--MYMLRYSQYIDALQHVLSTGQGVVLERSPYSDFVFME 199
            .:| |.|  .|..||.......::::  ||.:|..||.|||:|:||||||.||||||:|||||:|
 Frog   106 GNC-SLD--KFYNDPKCPDGNSYRLQYWMYSVRLMQYSDALEHLLSTGQGAVLERSPFSDFVFLE 167

  Fly   200 AMFRQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSDAY 264
            ||::.||:.:.....|||::.|:|.|.|.||||||:|:|...|.|:|..:....|.::.:   .|
 Frog   168 AMYKNGYIRKQCIDHYNEIKGNSIDEFLPPHLVIYVDVPAAEVHKKILEKGHTSEKKAAL---PY 229

  Fly   265 LSDLEQLYKQQYLKDISTHAELLIYDWTAGGETEVVVEDIERIDFN------QFEADIHNKKMLD 323
            |..:|..||..:|..||..:|:|.|......:.|.||||||.:.|:      |.:...|:.:|  
 Frog   230 LQSIEDTYKDSFLPQISEKSEVLKYSGNEVQDVEKVVEDIEYMKFDKGPWTEQTDVTFHHLRM-- 292

  Fly   324 WRFPLEAEWCEARIKYCHEKPDLMNYFNVPRFDVPELVRSADDGKVWRDVWFNAPGMKYRPGYNA 388
                           :..:|..:.:...|||: :||:...|.:.......:.:.||.||..||||
 Frog   293 ---------------FVEDKDKVASLITVPRY-IPEITIGASEYDSAYYQYRSLPGRKYAKGYNA 341

  Fly   389 DMGDEGLLTK 398
            |:||:.:..|
 Frog   342 DIGDKMIWLK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-42NP_001262821.1 NDUO42 84..308 CDD:238988 92/225 (41%)
ndufa10NP_001076817.1 NDUO42 55..273 CDD:238988 92/225 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 156 1.000 Domainoid score I4169
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H15342
Inparanoid 1 1.050 193 1.000 Inparanoid score I3728
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1147235at2759
OrthoFinder 1 1.000 - - FOG0006118
OrthoInspector 1 1.000 - - oto103784
Panther 1 1.100 - - LDO PTHR10513
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3846
SonicParanoid 1 1.000 - - X4410
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.190

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