DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-42 and dck

DIOPT Version :9

Sequence 1:NP_001262821.1 Gene:ND-42 / 42591 FlyBaseID:FBgn0019957 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001007057.1 Gene:dck / 474325 ZFINID:ZDB-GENE-041024-3 Length:263 Species:Danio rerio


Alignment Length:254 Identity:60/254 - (23%)
Similarity:96/254 - (37%) Gaps:47/254 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PRVPKAAPYPYKTKKYSVFNAIFDKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPA 113
            |...:|.|.|           :.|...||.    |.|.:||.||||||.|.: |.||.|.|:...
Zfish     3 PTAKRACPSP-----------LNDSLEKRL----KRISIEGNIAAGKSTFVR-LLEEHDREWEVV 51

  Fly   114 VDLDLIYIN-SYGYDMRKLDPQLPPSCRS-YDVRNFCLDPSHDLAAQFQIRMYMLRYSQYIDALQ 176
            .:....:.| ...:|..:   :|..|.:| .:|.....:.....|..||....|.|....|.:..
Zfish    52 PEPIARWCNVQTQHDDHE---ELTTSQKSGGNVLQMMYEKPERWAYTFQSYACMSRIRSQIKSTN 113

  Fly   177 HVLSTGQGVV--LERSPYSD-FVFMEAMFRQGYLSRGARSVYNELR---QNTIGELLKPHLVIYL 235
            ..|...:..|  .|||.||| ::|...::....::....::|.:..   ....|:.::...:|||
Zfish   114 GKLREAENPVQFFERSVYSDRYIFASNLYESECVNETEWAIYQDWHSWLHKQFGKHIELDGIIYL 178

  Fly   236 DLPVDAVKKQIKARNVDYEVQSKVFSDAYLSDLEQL-YKQQ-------------YLKDI 280
            ....:...:::..|..:.|      ....|..||:| ||.:             ||.|:
Zfish   179 RAKPERCLERLHLRGREEE------QGIPLEYLEKLHYKHECWLQHRTMSMDFDYLNDV 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-42NP_001262821.1 NDUO42 84..308 CDD:238988 52/219 (24%)
dckNP_001007057.1 dNK 24..261 CDD:279974 52/218 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1428
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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