DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-42 and Ndufa10l1

DIOPT Version :9

Sequence 1:NP_001262821.1 Gene:ND-42 / 42591 FlyBaseID:FBgn0019957 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_872612.1 Gene:Ndufa10l1 / 316632 RGDID:1589745 Length:355 Species:Rattus norvegicus


Alignment Length:362 Identity:135/362 - (37%)
Similarity:206/362 - (56%) Gaps:37/362 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GGPRVPKAAPYPYKTKKYSVFNAIF-DKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEY 110
            |..||.:.....:...:|.:..:|. |||:|:..|.|:||.|:|.|.:||:|.|:::||:|.|::
  Rat    21 GAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKH 85

  Fly   111 YPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDVRNFCLDPSHDLAAQFQIR--MYMLRYSQYID 173
            ||...:.  |.:|...|.|.||.:...||   .:..|..||..:....::::  :|..|..||.|
  Rat    86 YPEAGIQ--YSSSTTGDGRPLDIEFSGSC---SLEKFYDDPKSNDGNSYRLQSWLYASRLLQYSD 145

  Fly   174 ALQHVLSTGQGVVLERSPYSDFVFMEAMFRQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLP 238
            ||:|:||||||||||||.||||||:|||:.:|::.:.....|||:::.|:.|.|..|.|||:|:|
  Rat   146 ALEHLLSTGQGVVLERSIYSDFVFLEAMYNRGFIRKQCVDHYNEIKRLTLPEYLPSHAVIYIDVP 210

  Fly   239 VDAVKKQIKARNVDYEVQSKVFSDAYLSDLEQLYKQQYLKDISTHAELLIY-DWTAGGETEVVVE 302
            |..::.:|:.:...:|:  ||.| |||.|:|..||:.:|..:|...|:|:| .|.|...|: |||
  Rat   211 VSEIQSRIQKKGDPHEM--KVTS-AYLQDIEDAYKKTFLPQMSEICEVLMYSSWEAEDSTK-VVE 271

  Fly   303 DIERIDFN------QFEADIHNKKMLDWRFPLEAEWCEARIKYCHEKPDLMNYFNVPRFDVPELV 361
            |||.:::|      |.:...||.:||                 ..:|.:::||..||.: :||:.
  Rat   272 DIEYLNYNKGPWLKQDDRTFHNLRML-----------------VQDKREVLNYTTVPVY-LPEIT 318

  Fly   362 RSADDGKVWRDVWFNAPGMKYRPGYNADMGDEGLLTK 398
            ..|..|....|.:...||.||.||||||:||:.:..|
  Rat   319 IGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-42NP_001262821.1 NDUO42 84..308 CDD:238988 95/226 (42%)
Ndufa10l1NP_872612.1 NDUO42 59..277 CDD:238988 95/226 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346705
Domainoid 1 1.000 161 1.000 Domainoid score I3928
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15342
Inparanoid 1 1.050 213 1.000 Inparanoid score I3557
OMA 1 1.010 - - QHG45505
OrthoDB 1 1.010 - - D1147235at2759
OrthoFinder 1 1.000 - - FOG0006118
OrthoInspector 1 1.000 - - otm45448
orthoMCL 1 0.900 - - OOG6_107081
Panther 1 1.100 - - O PTHR10513
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4410
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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