DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-42 and dguok

DIOPT Version :9

Sequence 1:NP_001262821.1 Gene:ND-42 / 42591 FlyBaseID:FBgn0019957 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001093561.1 Gene:dguok / 100005067 ZFINID:ZDB-GENE-040625-14 Length:269 Species:Danio rerio


Alignment Length:276 Identity:67/276 - (24%)
Similarity:106/276 - (38%) Gaps:65/276 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 KTSKRFDENSKVIC----------------VEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIY- 120
            ||:||...:|.:.|                :||.||.|||.||:.|..       ...|.|:|. 
Zfish     4 KTAKRLLSSSALFCSPRNLMSTNNYIKRVSIEGNIAVGKSTFARLLQN-------ACPDWDVIAE 61

  Fly   121 -INSYGYDMRKLDPQLPPS------CRSYDVRNFCLDPSHDLAAQFQIRMYMLRYSQYIDALQHV 178
             ::.:    :.:| |.||:      |.|..:.....||.. .:..||....|.|....:..|...
Zfish    62 PVSKW----QNVD-QTPPTASSPQPCTSNLLEMMYRDPKR-WSYTFQSFSCMSRLRTQLQPLPDT 120

  Fly   179 L--STGQGV-VLERSPYSD-FVFMEAMFRQGYLSRGARSVYNELRQNTI---GELLKPHLVIYLD 236
            |  |.|..| |.|||.||| ::|...||..|.::....:||.:.....|   |..::...:|||.
Zfish   121 LLRSRGGAVRVYERSVYSDRYIFALNMFALGCINSTEWAVYQDWHSFLIEQFGHRVQLEGIIYLR 185

  Fly   237 L-PVDAVKKQIKARNVDYEVQSKVFSDAYLSDLEQLYKQQYLKDISTHAELLIYDWTAGGETEVV 300
            . |...:::..:...|:                ||..:..||:.:.|..|    ||.....|.:.
Zfish   186 ASPQMCLERLNRRARVE----------------EQEIELDYLEKLHTRHE----DWLINKTTTLH 230

  Fly   301 VEDIERIDFNQFEADI 316
            .|.:.::.....:|::
Zfish   231 FEQLMKVPVLVLDAEV 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-42NP_001262821.1 NDUO42 84..308 CDD:238988 61/255 (24%)
dguokNP_001093561.1 dNK 32..267 CDD:279974 61/248 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1428
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.