DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cchl and hccs

DIOPT Version :10

Sequence 1:NP_651003.1 Gene:Cchl / 42590 FlyBaseID:FBgn0038925 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001234906.1 Gene:hccs / 448226 XenbaseID:XB-GENE-951278 Length:308 Species:Xenopus tropicalis


Alignment Length:307 Identity:160/307 - (52%)
Similarity:192/307 - (62%) Gaps:61/307 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MEATKSVP--------VDHAKYMSGSGAPPPECPMHQKHGDAKSASAVPP--------------H 53
            |.|:.|.|        .:.||..|.. :||||||||||..:...|||:.|              |
 Frog     4 MGASASTPSSAPPQSSTESAKTYSAE-SPPPECPMHQKKMEGMGASAINPSSIPSQSSTESAKTH 67

  Fly    54 P--------KMQAAS-------------------------ECPVQHD-NSDVNPLNMMPPANQQP 84
            |        ||:...                         :||::.. ..|::|.|||||.||.|
 Frog    68 PAECPMHQKKMEGCPMHKESIQNTENCSGPTHQEEAYRYVQCPMRSGVKDDIDPSNMMPPPNQTP 132

  Fly    85 AADQPFPLPTDRQTSTIPKVTEDGSVQFWQYPSQQMFWNAMLRKGWRWKTEDVSQKDMGDIIRIH 149
            |.||||.|...|:.||||:.:.|.:   |.|||:|||||||||||||||.:|:..:||.:|||||
 Frog   133 ATDQPFSLSLAREESTIPRSSTDKN---WVYPSEQMFWNAMLRKGWRWKEDDLKPEDMTNIIRIH 194

  Fly   150 NANNEQAWQEVLKWEALHAKECG-NPRLKSFGGKAKDFSPRARFRSWLGYELPFDRHDWIVDRCG 213
            |.||||||.|:|||||||||||. .|.|..|||||.::|||||.|||:|||||||||||||||||
 Frog   195 NKNNEQAWSEILKWEALHAKECPCGPTLVRFGGKATEYSPRARMRSWMGYELPFDRHDWIVDRCG 259

  Fly   214 KDVRYVIDYYDGGLVDKDYRFALLDVRPAMDSVDNVWDRMRVAYMRW 260
            |:|||||||||||.|||:|:|.:||||||.||:..:||||:||:.||
 Frog   260 KEVRYVIDYYDGGEVDKNYQFTILDVRPAFDSMGAIWDRMKVAWWRW 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CchlNP_651003.1 Cyto_heme_lyase 12..260 CDD:426167 157/304 (52%)
hccsNP_001234906.1 Cyto_heme_lyase 12..302 CDD:426167 152/293 (52%)

Return to query results.
Submit another query.