DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6028 and AT3G16700

DIOPT Version :10

Sequence 1:NP_651002.3 Gene:CG6028 / 42589 FlyBaseID:FBgn0038924 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_188292.1 Gene:AT3G16700 / 820922 AraportID:AT3G16700 Length:224 Species:Arabidopsis thaliana


Alignment Length:206 Identity:74/206 - (35%)
Similarity:118/206 - (57%) Gaps:12/206 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 KIICIGLNYQDHCDEQNKPTPKEPLFFSKFNNALVGPQDNV-IAHAASSKIDWEVELVCVIGKVA 147
            ||:.:||||..|..|.....||:|:.|.|..::.:.....: |.|...| :..||||..|||:.|
plant    15 KIVGVGLNYASHAKELGNALPKDPIVFLKPTSSYLENGGTIEIPHPLDS-LHHEVELAVVIGQKA 78

  Fly   148 RQVPKSQAMDYVFGYSVAQDISARDWQKE--RNGGQFLMGKSMDTFLPLGPAVVHKSLVPDVYNL 210
            |.||:..||:|:.||::|.|::||:.|..  .:|....:.|..|||.|:. :|:.|::|.|..||
plant    79 RDVPERLAMNYIGGYALALDMTARELQVSAMASGLPCTLAKGQDTFTPIS-SVLPKAMVLDPNNL 142

  Fly   211 NLKTWVNGVEKQNGNTGNLIFKLDDVINRLSQTITLLPGDIIVTGTPKGVGMHRTPPEFLQPGDV 275
            .|...|:...:|.|.|.::|||:..:|:.:|..:||..||:|:||||:|:|.       ::.|..
plant   143 ELWLKVDDETRQKGWTKDMIFKVPYLISYISSVMTLFKGDVILTGTPEGIGP-------VKIGQK 200

  Fly   276 VQSEIVGLGKL 286
            :.:.|.||.::
plant   201 ITAGITGLSEV 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6028NP_651002.3 YcgM 77..291 CDD:439949 74/206 (36%)
AT3G16700NP_188292.1 YcgM 14..216 CDD:439949 74/206 (36%)

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