DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6028 and Faa

DIOPT Version :10

Sequence 1:NP_651002.3 Gene:CG6028 / 42589 FlyBaseID:FBgn0038924 Length:293 Species:Drosophila melanogaster
Sequence 2:NP_524830.2 Gene:Faa / 45577 FlyBaseID:FBgn0016013 Length:417 Species:Drosophila melanogaster


Alignment Length:186 Identity:39/186 - (20%)
Similarity:66/186 - (35%) Gaps:63/186 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 ASSKIDWEVELVCVIGKVARQVPK----SQAMDYVFGYSVAQDISARDWQKERNGGQFLMGKSMD 189
            |...:|:|:|:...||....|:.:    .:|...|||:::..|.||||.||..            
  Fly   189 ACKLLDFELEMAFFIGGKGNQLGEPIRVDEAWKNVFGFTLMNDWSARDIQKWE------------ 241

  Fly   190 TFLPLGPAVVHKSL-----------------------------------VPDVYNLNLKTWVNGV 219
             ::||||... |:|                                   :|..:::||:..:...
  Fly   242 -YVPLGPFTA-KNLGTTISPWVVPTAALKPFVLDNFPQEPEVLPYLRQNIPFNFDINLEVSLKPA 304

  Fly   220 EKQNGNTGNLIFK------LDDVINRLSQTITLLPGDIIVTGTPKGVGMHRTPPEF 269
            ::.........||      |..:.:.......|.|||::.:||..|    .||..:
  Fly   305 DQNEALISKSNFKHLYWTPLQQIAHHTVTGCNLRPGDLMASGTISG----ETPDSY 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6028NP_651002.3 YcgM 77..291 CDD:439949 39/186 (21%)
FaaNP_524830.2 PLN02856 1..414 CDD:215461 39/186 (21%)

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