DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6028 and fahd2a

DIOPT Version :10

Sequence 1:NP_651002.3 Gene:CG6028 / 42589 FlyBaseID:FBgn0038924 Length:293 Species:Drosophila melanogaster
Sequence 2:XP_021333901.1 Gene:fahd2a / 405854 ZFINID:ZDB-GENE-040426-2499 Length:346 Species:Danio rerio


Alignment Length:284 Identity:119/284 - (41%)
Similarity:183/284 - (64%) Gaps:14/284 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RMRFVQYLRK-GDLAKRLGLLSEDQKSLVEFAGLE-GVPSDLKILIAQDPNLEELAKKAEKQ--- 64
            |||.||:..| .:...|:|:..::.:.:|:....: .:||.::..:...|...:.||:|...   
Zfish    30 RMRLVQFCHKVAEGIVRVGVEQDEGQGIVDLKAFDPSMPSTMREFLELGPKGMDCAKRALSSGQN 94

  Fly    65 --PRLEVNDDVTLLPPLTDPGKIICIGLNYQDHCDEQNKPTPKEPLFFSKFNNALVGPQDNVIAH 127
              ||    .|:.||.|:|:|.|::|:|:||:|||.|||.|.||||:.||||..::.||.|::|..
Zfish    95 VLPR----SDIRLLSPVTNPEKVVCVGMNYKDHCLEQNAPIPKEPIIFSKFPCSITGPNDDIILP 155

  Fly   128 AASSKIDWEVELVCVIGKVARQVPKSQAMDYVFGYSVAQDISARDWQKERNGGQFLMGKSMDTFL 192
            ..|.::||||||..|||:..:.:.:.:|:.|:.|::||.|:||||||.:|||.|:|:||:.|||.
Zfish   156 DESQEVDWEVELAFVIGRKGKHIKEEEALSYIAGFTVANDVSARDWQMKRNGKQWLLGKTFDTFC 220

  Fly   193 PLGPAVVHKSLVPDVYNLNLKTWVNGVEKQNGNTGNLIFKLDDVINRLSQTITLLPGDIIVTGTP 257
            |||||:|....:.||:.|.::.:|||...|..||..:||:.:.|:..:||.:||.|||:.:||||
Zfish   221 PLGPALVTTDSLKDVHKLGIRCFVNGATVQESNTNQMIFQTEKVVAWVSQFVTLYPGDVFLTGTP 285

  Fly   258 KGVGMHRTPPEFLQPGDVVQSEIV 281
            .|||:.|.||.||:|   :.||::
Zfish   286 PGVGVFRNPPVFLKP---ISSELI 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6028NP_651002.3 YcgM 77..291 CDD:439949 99/205 (48%)
fahd2aXP_021333901.1 YcgM 106..290 CDD:439949 90/183 (49%)

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