DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL35 and Mrpl35

DIOPT Version :9

Sequence 1:NP_651001.2 Gene:mRpL35 / 42588 FlyBaseID:FBgn0038923 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_079706.1 Gene:Mrpl35 / 66223 MGIID:1913473 Length:188 Species:Mus musculus


Alignment Length:172 Identity:69/172 - (40%)
Similarity:95/172 - (55%) Gaps:16/172 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRTFVTSALRSVCRQSPAASSLVPLVQRTQRATLMTLSRPCLLPTPSLASPAH----HQLLQLPG 62
            |....:|..|:..|.:...|||..:..|..:.:::: |.|.|     :.|..|    |....|..
Mouse    20 LNVLASSTYRNCARNACLNSSLCTIHFRHIQTSVVS-SAPRL-----VTSVGHLAYGHTTTVLNR 78

  Fly    63 VLAATGTPS----NTRNVTKFSLVKGKRKTVKAVLKRFKRLDWGAWIRTHSGRQKKLFKKSAALR 123
            |  ||..||    ..|.:|..|..||||||||:|:.||.||..|.|:|..:|.:|||:|||.|.:
Mouse    79 V--ATLVPSVLKPPVRALTYCSTRKGKRKTVKSVVHRFLRLHSGLWLRRKAGYKKKLWKKSTARK 141

  Fly   124 RRLKQHVFTNATQSWLLDKMVTSYWRRPKHFINDPYKPYHSR 165
            :||::.||.:.|||.|||||.||:|:|...:..|||:.||.|
Mouse   142 KRLREFVFCSKTQSKLLDKMTTSFWKRRNWYAGDPYQMYHDR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL35NP_651001.2 Ribosomal_L35p 84..144 CDD:279904 34/59 (58%)
Mrpl35NP_079706.1 Ribosomal_L35p 102..161 CDD:396277 33/58 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840850
Domainoid 1 1.000 71 1.000 Domainoid score I9456
eggNOG 1 0.900 - - E1_KOG4316
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 104 1.000 Inparanoid score I4935
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006134
OrthoInspector 1 1.000 - - oto91968
orthoMCL 1 0.900 - - OOG6_109479
Panther 1 1.100 - - LDO PTHR15909
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2759
SonicParanoid 1 1.000 - - X4424
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

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