DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL35 and Mrpl35

DIOPT Version :10

Sequence 1:NP_651001.2 Gene:mRpL35 / 42588 FlyBaseID:FBgn0038923 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001100066.1 Gene:Mrpl35 / 297334 RGDID:1307065 Length:188 Species:Rattus norvegicus


Alignment Length:170 Identity:69/170 - (40%)
Similarity:92/170 - (54%) Gaps:12/170 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRTFVTSALRSVCRQSPAASSLVPLVQRTQRATLMTLSRPCLLPTPSLASPAHHQLLQLPGVL-- 64
            |...|:|..|: |.::...||.:..:......|.:..|.|.|     :.|..|........||  
  Rat    20 LNVSVSSTYRN-CARNACLSSALRTIPFRHIQTSVVSSAPRL-----VKSVGHLAYGHTASVLNR 78

  Fly    65 AATGTPS----NTRNVTKFSLVKGKRKTVKAVLKRFKRLDWGAWIRTHSGRQKKLFKKSAALRRR 125
            .||..||    ..|.:|..|..||||||||:|:.||.||..|.|:|..:|.:|||:|||.|.::|
  Rat    79 VATLVPSVLKPPVRALTYCSARKGKRKTVKSVVHRFLRLHSGLWLRRKAGYKKKLWKKSTARKKR 143

  Fly   126 LKQHVFTNATQSWLLDKMVTSYWRRPKHFINDPYKPYHSR 165
            |::.||.|.|||.|||||.||:|:|...:..|||:.||.|
  Rat   144 LREFVFCNKTQSKLLDKMTTSFWKRRNWYTGDPYQMYHDR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL35NP_651001.2 Ribosomal_L35p 84..144 CDD:460273 35/59 (59%)
Mrpl35NP_001100066.1 Ribosomal_L35p 102..161 CDD:460273 34/58 (59%)

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