DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and IDH1

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_014361.1 Gene:IDH1 / 855691 SGDID:S000004982 Length:360 Species:Saccharomyces cerevisiae


Alignment Length:372 Identity:176/372 - (47%)
Similarity:246/372 - (66%) Gaps:18/372 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MLARTVGRTFMQAAAARSLHTTSTLRAT--DNYGANRTTCTLIPGDGVGPELVYSLQEVFKAASV 65
            ||.||:        |.|:|.|.:....|  ..|| .|.|.|||||||||.|:..|::.:|:|.::
Yeast     1 MLNRTI--------AKRTLATAAQAERTLPKKYG-GRFTVTLIPGDGVGKEITDSVRTIFEAENI 56

  Fly    66 PVDFECYFLSEINPVLSAKLEDVVASIQKNKVCIKGVLATP-DYSNVGDLQTLNMKLRNDLDLYA 129
            |:|:|...:.:.:.  ...:.:.|.|:::||:.:||:..|| |.:..|   :||:.||..||:||
Yeast    57 PIDWETINIKQTDH--KEGVYEAVESLKRNKIGLKGLWHTPADQTGHG---SLNVALRKQLDIYA 116

  Fly   130 NVVHVRSLPGVKTRHTNIDTVIIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYA 194
            ||...:||.|||||..:||.::|||.||||:|.||||||||:||.||::|..|:.|||:||||:|
Yeast   117 NVALFKSLKGVKTRIPDIDLIVIRENTEGEFSGLEHESVPGVVESLKVMTRPKTERIARFAFDFA 181

  Fly   195 TKNQRKKVTAVHKANIMKLGDGLFLRSCEEV-SRLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVT 258
            .|..||.|||||||||||||||||.....|: .:.||.|....:||||.:||.|:.|:||||:||
Yeast   182 KKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEYPDIDVSSIIVDNASMQAVAKPHQFDVLVT 246

  Fly   259 PNLYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTFAEAVGKNVANPTAMLLCGVKLLR 323
            |::||.|:.|:.:.|:||.|:||||::..:..|||||:||...:..|:||||||||:|....:|.
Yeast   247 PSMYGTILGNIGAALIGGPGLVAGANFGRDYAVFEPGSRHVGLDIKGQNVANPTAMILSSTLMLN 311

  Fly   324 HINLPTYGEIIQNAINKVLNDGKVRTKDLGGQSTTQDFTRAIILNMS 370
            |:.|..|...|..|:::.:.:||..|:|:||.|:|.|||..||..:|
Yeast   312 HLGLNEYATRISKAVHETIAEGKHTTRDIGGSSSTTDFTNEIINKLS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 164/333 (49%)
IDH1NP_014361.1 mito_nad_idh 26..357 CDD:272942 165/336 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346416
Domainoid 1 1.000 314 1.000 Domainoid score I197
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5035
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S528
OMA 1 1.010 - - QHG53770
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.690

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