DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and IMD2

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_178171.1 Gene:IMD2 / 844395 AraportID:AT1G80560 Length:405 Species:Arabidopsis thaliana


Alignment Length:386 Identity:110/386 - (28%)
Similarity:182/386 - (47%) Gaps:54/386 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VGRTFMQAAAARSLHTTSTLRATDNYGANRTTCTLIPGDGVGPELVYSLQEVFKAASVPVDFECY 72
            |..|| :|.:.:||.......|..:.|..|.|.||:||||:|||:|...:.|.:.|......|..
plant    14 VPATF-RAVSKQSLAPFRVRCAVASPGKKRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFN 77

  Fly    73 FLSEINPVLSAKL--------EDVVASIQKNKVCIKGVLATPDYSN--------VGDLQTLNMKL 121
            |..  .|:..|.|        |:.:::.:::...:.|.:....:.|        .|.||     :
plant    78 FRE--MPIGGAALDLVGVPLPEETISAAKESDAVLLGAIGGYKWDNNEKHLRPEKGLLQ-----I 135

  Fly   122 RNDLDLYANVVHVRSLPGVKTRHT-------NIDTVIIREQTEGEY-----SALEHESVPGIVEC 174
            |..|.::||:.....||.:....|       .:|.:::||.|.|.|     ....:|:...:...
plant   136 RAALKVFANLRPATVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFN 200

  Fly   175 LKIITAKKSMRIAKFAFDYATKNQRKKVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIV 239
            .::..|.:..|||:.||:.|.| :|.|:.:|.|||::: ...|:.:....::..||.::...|.|
plant   201 TEVYAAHEIDRIARVAFETARK-RRGKLCSVDKANVLE-ASILWRKRVTALASEYPDVELSHMYV 263

  Fly   240 DNTTMQMVSNPNQFDVMVTPNLYGAIVDNLASGLVGGAGVVAGASYS-SESVVFEPGARHTFAEA 303
            ||..||:|.:|.|||.:||.|::|.|:.:.||.:.|..|::..||.| |...:||| ...:..:.
plant   264 DNAAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSGPGLFEP-IHGSAPDI 327

  Fly   304 VGKNVANPTAMLLCGVKLLRHINLPTYG-------EIIQNAINKVLNDGKVRTKDLGGQST 357
            .|::.|||.|.:|....||:      ||       :.|::|:...||:| .||.|:....|
plant   328 AGQDKANPLATILSAAMLLK------YGLGEEKAAKRIEDAVLVALNNG-FRTGDIYSAGT 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 102/357 (29%)
IMD2NP_178171.1 Iso_dh 1..405 CDD:351095 110/386 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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