DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and IDH-IV

DIOPT Version :10

Sequence 1:NP_651000.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_174526.2 Gene:IDH-IV / 840142 AraportID:AT1G32480 Length:214 Species:Arabidopsis thaliana


Alignment Length:215 Identity:92/215 - (42%)
Similarity:132/215 - (61%) Gaps:22/215 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNKVCIKGVLATPDYSNVGDLQTLNM 119
            ::.:|..|...||.||.|.:...|  ::....:||.||:|||||:.|              .:|.
plant    15 AVHQVMDAMQAPVYFETYIIKGKN--MNHLTWEVVDSIRKNKVCLNG--------------RVNN 63

  Fly   120 KL----RNDLDLYANVVHVRSLPGVKTRHTNIDTVIIREQTEGEYSALEHESVPGIVECLKIITA 180
            .|    |.:|||:|::|...:|.|..:||.|:|.|:|||.|||||:..|||.|||::|..::...
plant    64 SLCGGARKELDLFASLVDCFNLNGQPSRHENVDIVVIRENTEGEYAGREHEVVPGVIESFQVTMT 128

  Fly   181 K-KSMRIAKFAFDYATKNQRKKVTAVH-KANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIVDNTT 243
            | .|.||||:||:||..::|||||||| .....||.|..||.||:||:::||.|.:.::.::|..
plant   129 KFWSDRIAKYAFEYAHFSKRKKVTAVHNNGKYEKLADAFFLESCQEVAKMYPNITYNEIGINNCC 193

  Fly   244 MQMVSNPNQFDVMVTPNLYG 263
            :|:|..|.:|||:|||||||
plant   194 LQLVEKPERFDVIVTPNLYG 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_651000.1 Iso_dh 37..369 CDD:444908 92/215 (43%)
IDH-IVNP_174526.2 Iso_dh 2..>213 CDD:444908 90/213 (42%)

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