DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and IDH-III

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_195290.1 Gene:IDH-III / 829717 AraportID:AT4G35650 Length:368 Species:Arabidopsis thaliana


Alignment Length:353 Identity:175/353 - (49%)
Similarity:239/353 - (67%) Gaps:16/353 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SLHTTSTLRATDNYGANRTTCTLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAK 84
            ||..:.|.......||.||. |||||||:||.:..::::|.:|...||.||.|   |:...:...
plant    22 SLSRSITYMPRPGDGAPRTV-TLIPGDGIGPLVTGAVEQVMEAMHAPVHFERY---EVLGNMRKV 82

  Fly    85 LEDVVASIQKNKVCIKGVLATPDYSNVGDLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDT 149
            .|:|:.|:::||||:||.||||   ..|.:.:|||:||.:||::|::|:..::||:.|||.|:|.
plant    83 PEEVIESVKRNKVCLKGGLATP---VGGGVSSLNMQLRKELDIFASLVNCINVPGLVTRHENVDI 144

  Fly   150 VIIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYATKNQRKKVTAVHKANIMKLG 214
            |:|||.||||||.||||.|||:||.||:||...|.|||::||:||..|.|||||||||||||||.
plant   145 VVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIARYAFEYAYLNNRKKVTAVHKANIMKLA 209

  Fly   215 DGLFLRSCEEVSRLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVTPNLYGAIVDNLASGLVGGAGV 279
            |||||.||.||::.|..|.:.::||||..||:|:.|.||||||||||||.::.|.|:|:.||.||
plant   210 DGLFLESCREVAKHYSGITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLIANTAAGIAGGTGV 274

  Fly   280 VAGASYSSESVVFEPGARHTFAEAVG------KNVANPTAMLLCGVKLLRHINLPTYGEIIQNAI 338
            :.|.:..:|..:||.||.   |..||      :..|||.|:||....:|||:..||:.:.::.|:
plant   275 MPGGNVGAEHAIFEQGAS---AGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLETAV 336

  Fly   339 NKVLNDGKVRTKDLGGQSTTQDFTRAII 366
            .:|:.:||.|||||||..|||:...|:|
plant   337 KQVIKEGKYRTKDLGGDCTTQEVVDAVI 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 170/336 (51%)
IDH-IIINP_195290.1 PLN00123 8..368 CDD:215065 175/353 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 331 1.000 Domainoid score I260
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 335 1.000 Inparanoid score I666
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - O PTHR11835
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1965
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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