DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and IDH2

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_179304.1 Gene:IDH2 / 816218 AraportID:AT2G17130 Length:367 Species:Arabidopsis thaliana


Alignment Length:335 Identity:172/335 - (51%)
Similarity:235/335 - (70%) Gaps:15/335 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNKVCIKGVLAT 105
            ||||||||||.:..::|:|.:|...||.||.:   |::..:.:..|.::.||:|||||:||.|.|
plant    41 TLIPGDGVGPLVTNAVQQVMEAMHAPVYFEPF---EVHGDMKSLPEGLLESIKKNKVCLKGGLKT 102

  Fly   106 PDYSNVGDLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDTVIIREQTEGEYSALEHESVPG 170
            |   ..|.:.:||:.||.:|||:|::|:..:|||:.:||.|:|.|:|||.|||||:.||||.|||
plant   103 P---VGGGVSSLNVNLRKELDLFASLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPG 164

  Fly   171 IVECLKIITAKKSMRIAKFAFDYATKNQRKKVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFE 235
            :||.||:||...|.||||:||:||..|.|||||||||||||||.|||||.||:||::.||.|.:.
plant   165 VVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYN 229

  Fly   236 KMIVDNTTMQMVSNPNQFDVMVTPNLYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTF 300
            ::||||..||:|:.|.||||||||||||.:|.|.|:|:.||.||:.|.:..:|..|||.||.   
plant   230 EIIVDNCCMQLVARPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQGAS--- 291

  Fly   301 AEAVGKNV------ANPTAMLLCGVKLLRHINLPTYGEIIQNAINKVLNDGKVRTKDLGGQSTTQ 359
            |..|||:.      |||.|:||....:|||:..|::.:.::.|:.:|:.:|..||:||||.||||
plant   292 AGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQ 356

  Fly   360 DFTRAIILNM 369
            :...|:|.|:
plant   357 EVVDAVIANL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 171/333 (51%)
IDH2NP_179304.1 PLN00123 8..367 CDD:215065 172/335 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 331 1.000 Domainoid score I260
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5035
Inparanoid 1 1.050 335 1.000 Inparanoid score I666
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D868374at2759
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - O PTHR11835
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1965
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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