DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idh3b and IDH2

DIOPT Version :10

Sequence 1:NP_651000.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_179304.1 Gene:IDH2 / 816218 AraportID:AT2G17130 Length:367 Species:Arabidopsis thaliana


Alignment Length:335 Identity:172/335 - (51%)
Similarity:235/335 - (70%) Gaps:15/335 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNKVCIKGVLAT 105
            ||||||||||.:..::|:|.:|...||.||.:   |::..:.:..|.::.||:|||||:||.|.|
plant    41 TLIPGDGVGPLVTNAVQQVMEAMHAPVYFEPF---EVHGDMKSLPEGLLESIKKNKVCLKGGLKT 102

  Fly   106 PDYSNVGDLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDTVIIREQTEGEYSALEHESVPG 170
            |   ..|.:.:||:.||.:|||:|::|:..:|||:.:||.|:|.|:|||.|||||:.||||.|||
plant   103 P---VGGGVSSLNVNLRKELDLFASLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPG 164

  Fly   171 IVECLKIITAKKSMRIAKFAFDYATKNQRKKVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFE 235
            :||.||:||...|.||||:||:||..|.|||||||||||||||.|||||.||:||::.||.|.:.
plant   165 VVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYN 229

  Fly   236 KMIVDNTTMQMVSNPNQFDVMVTPNLYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTF 300
            ::||||..||:|:.|.||||||||||||.:|.|.|:|:.||.||:.|.:..:|..|||.||.   
plant   230 EIIVDNCCMQLVARPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQGAS--- 291

  Fly   301 AEAVGKNV------ANPTAMLLCGVKLLRHINLPTYGEIIQNAINKVLNDGKVRTKDLGGQSTTQ 359
            |..|||:.      |||.|:||....:|||:..|::.:.::.|:.:|:.:|..||:||||.||||
plant   292 AGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQ 356

  Fly   360 DFTRAIILNM 369
            :...|:|.|:
plant   357 EVVDAVIANL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_651000.1 Iso_dh 37..369 CDD:444908 171/333 (51%)
IDH2NP_179304.1 PLN00123 8..367 CDD:215065 172/335 (51%)

Return to query results.
Submit another query.