DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and CG5028

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001097922.1 Gene:CG5028 / 43102 FlyBaseID:FBgn0039358 Length:402 Species:Drosophila melanogaster


Alignment Length:364 Identity:158/364 - (43%)
Similarity:231/364 - (63%) Gaps:26/364 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HTTSTLR----ATD----NYGANRTTCTLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEIN 78
            ||.|.|:    .||    .|| .|...|::||.|:||||:..::|:|:....|:|||   :.:|:
  Fly    35 HTKSALQKKVTGTDIPSAQYG-GRHAVTMLPGGGIGPELMGYVREIFRYCGAPIDFE---VIDID 95

  Fly    79 PVLSAK--LEDVVASIQKNKVCIKGVLATPDYSNVGDLQTL-----NMKLRNDLDLYANVVHVRS 136
            |.....  |:..:.||::|.|.:||.:.|..       |:|     |:.:||:||||.||||.:|
  Fly    96 PSTEGNDDLDYAITSIKRNGVALKGNIETKS-------QSLTEVSRNVAIRNELDLYVNVVHCKS 153

  Fly   137 LPGVKTRHTNIDTVIIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYATKNQRKK 201
            .||:..||.:||.|:||:.|:|||:.|||||||||||.:|::|.:.:.|:|::||::|.:|.|||
  Fly   154 YPGIPARHHDIDVVLIRQNTDGEYAMLEHESVPGIVESMKVVTVENAERVARYAFEFARQNNRKK 218

  Fly   202 VTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVTPNLYGAIV 266
            ||.:||||||||.|||||.....|.:.||.::...||:|||.||.||||:|||||...||||.||
  Fly   219 VTTIHKANIMKLSDGLFLEVANRVHKDYPELEHNNMIIDNTCMQSVSNPHQFDVMNMTNLYGTIV 283

  Fly   267 DNLASGLVGGAGVVAGASYSSESVVFEPGARHTFAEAVGKNVANPTAMLLCGVKLLRHINLPTYG 331
            .|:..||:||||:::|.:|.....:||||.|:|.....|||:|||.||:...:.:|.|:....:.
  Fly   284 SNVLCGLMGGAGLISGRNYGDHYAIFEPGTRNTGTAIAGKNIANPVAMISASIDMLNHLGHKEHA 348

  Fly   332 EIIQNAINKVLNDGKVRTKDLGGQSTTQDFTRAIILNMS 370
            .:||.|:.:.:.:..:||.|:||.:::.|....|:..:|
  Fly   349 NVIQEAVYQTIVNDAIRTPDIGGTNSSTDVVENILKILS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 149/338 (44%)
CG5028NP_001097922.1 mito_nad_idh 55..386 CDD:272942 150/341 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469774
Domainoid 1 1.000 180 1.000 Domainoid score I145
eggNOG 1 0.900 - - E1_COG0473
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I184
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - otm51400
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - P PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 00.000 Not matched by this tool.
1110.830

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