DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and idh3b

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_017208256.1 Gene:idh3b / 415247 ZFINID:ZDB-GENE-040625-174 Length:386 Species:Danio rerio


Alignment Length:371 Identity:222/371 - (59%)
Similarity:282/371 - (76%) Gaps:7/371 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LARTVGRTFMQAAAARSLHTTSTLRATDNYGANRTT---CTLIPGDGVGPELVYSLQEVFKAASV 65
            ||:.:....:|...||||..||:....::..|...:   .|::|||||||||:.:::||||||.|
Zfish    13 LAKGLTGVRLQPLCARSLSLTSSQNVPESPPARADSTFKVTMVPGDGVGPELMTAVKEVFKAADV 77

  Fly    66 PVDFECYFLSEI-NPVLSAKLEDVVASIQKNKVCIKGVLATP-DYSNVGDLQTLNMKLRNDLDLY 128
            ||:||.:.|||: |.....||.:|::|::.|:|.|||.:.|| :|.  |:|.:..|:||..|||:
Zfish    78 PVEFEEFHLSEVQNMASEEKLNEVLSSMKNNRVAIKGKIHTPMEYK--GELASYEMRLRRKLDLF 140

  Fly   129 ANVVHVRSLPGVKTRHTNIDTVIIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDY 193
            ||||||:||||..|||.|:|.||||||||||||:||||||.|:||||||||.:||.|||||||||
Zfish   141 ANVVHVKSLPGYSTRHNNLDLVIIREQTEGEYSSLEHESVAGVVECLKIITREKSRRIAKFAFDY 205

  Fly   194 ATKNQRKKVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVT 258
            |||..|.|||||||||||||||||||:||.||:.|||:|::|.:|:||..||:|.||.||||:|.
Zfish   206 ATKKGRSKVTAVHKANIMKLGDGLFLQSCAEVAELYPKIKYENVIIDNCCMQLVQNPYQFDVLVM 270

  Fly   259 PNLYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTFAEAVGKNVANPTAMLLCGVKLLR 323
            |||||.|:||||:|||||||||.|.|||:|..|||.||||.||:|||:|:||||||||....:|:
Zfish   271 PNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLK 335

  Fly   324 HINLPTYGEIIQNAINKVLNDGKVRTKDLGGQSTTQDFTRAIILNM 369
            |:||..:..::..|:.||:..|||||:||||.|||.||.|||:.::
Zfish   336 HLNLEYHSNMVSEAVKKVIKQGKVRTRDLGGYSTTGDFIRAIVASL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 212/336 (63%)
idh3bXP_017208256.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595645
Domainoid 1 1.000 423 1.000 Domainoid score I603
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5035
Inparanoid 1 1.050 432 1.000 Inparanoid score I1683
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - oto39674
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 1 1.000 - - X1965
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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