DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and idhg-1

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_497927.2 Gene:idhg-1 / 175598 WormBaseID:WBGene00009440 Length:396 Species:Caenorhabditis elegans


Alignment Length:351 Identity:157/351 - (44%)
Similarity:230/351 - (65%) Gaps:11/351 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LHTTSTLRATDNYGANRTTCTLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKL 85
            |.|.:|..|  .|| .|...|::||||:|||:::.::.:..|...|||||...|:..... |..|
 Worm    38 LQTNTTKLA--RYG-GRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDA-SEDL 98

  Fly    86 EDVVASIQKNKVCIKGVLATPDYSNVGDLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDTV 150
            .:.:.:|::|.|.:||.:.| .:.| ....:.|::||..|:|||||:|..::|.|.:|||.||.|
 Worm    99 AEAITAIKRNGVALKGNIET-KFDN-PSFVSRNLELRRQLNLYANVLHCSTIPTVPSRHTGIDMV 161

  Fly   151 IIREQTEGEYSALEHESV----PGIVECLKIITAKKSMRIAKFAFDYATKNQRKKVTAVHKANIM 211
            ||||.||||||..|||:|    |.:||.||::|.:||.:|.:|||.:|.|..||||||||||||.
 Worm   162 IIRENTEGEYSGNEHEAVNAPHPRVVESLKVVTREKSEQITRFAFQFAKKYGRKKVTAVHKANIQ 226

  Fly   212 KLGDGLFLRSCEEVSRL-YPRIQFEKMIVDNTTMQMVSNPNQFDVMVTPNLYGAIVDNLASGLVG 275
            ||||||||:...::::. ||.|:|..|||||.:||:||.|.|||||:.|||||.|:.|:|.||||
 Worm   227 KLGDGLFLKVATDIAKAEYPDIEFNAMIVDNASMQLVSRPQQFDVMLMPNLYGNIISNIACGLVG 291

  Fly   276 GAGVVAGASYSSESVVFEPGARHTFAEAVGKNVANPTAMLLCGVKLLRHINLPTYGEIIQNAINK 340
            |.|:|:|.:...:..|||.|.|:|.....||::|||||.:...|.:||.:.|.::.::|.:::.:
 Worm   292 GPGLVSGMNIGEDYAVFETGTRNTGTTLAGKDLANPTAFIRAAVDMLRFLGLQSHADMISDSLFR 356

  Fly   341 VLNDGKVRTKDLGGQSTTQDFTRAII 366
            .|.|.::.|.|:||.|.:.:..::::
 Worm   357 TLVDKRIHTADIGGTSKSSELVQSVL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 151/335 (45%)
idhg-1NP_497927.2 Iso_dh 49..383 CDD:294303 152/338 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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